RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 SLC39A4Q6P5W5 647 aa23.47■■□□□ 1.35
LIMS2-202ENST00000355119 DDX42Q86XP3 938 aaKnown RBP eCLIP23.47■■□□□ 1.35
LIMS2-202ENST00000355119 APOBEC3FQ8IUX4 373 aaKnown RBP23.47■■□□□ 1.35
LIMS2-202ENST00000355119 FBXL13Q8NEE6 735 aa23.47■■□□□ 1.35
LIMS2-202ENST00000355119 POMGNT1Q8WZA1 660 aa23.47■■□□□ 1.35
LIMS2-202ENST00000355119 ZKSCAN4Q969J2 545 aaPredicted RBP23.47■■□□□ 1.35
LIMS2-202ENST00000355119 PDLIM7Q9NR12 457 aa23.47■■□□□ 1.35
LIMS2-202ENST00000355119 SYNGAP1Q96PV0 1343 aa23.47■■□□□ 1.35
LIMS2-202ENST00000355119 COL11A1P12107 1806 aaPredicted RBP23.46■■□□□ 1.35
LIMS2-202ENST00000355119 BRCA1P38398 1863 aaKnown RBP23.46■■□□□ 1.35
LIMS2-202ENST00000355119 RLFQ13129 1914 aa23.46■■□□□ 1.35
LIMS2-202ENST00000355119 HELQQ8TDG4 1101 aa23.46■■□□□ 1.35
LIMS2-202ENST00000355119 IFT74Q96LB3 600 aa23.46■■□□□ 1.35
LIMS2-202ENST00000355119 ACAD9Q9H845 621 aa23.46■■□□□ 1.35
LIMS2-202ENST00000355119 ATP6V0A4Q9HBG4 840 aa23.46■■□□□ 1.35
LIMS2-202ENST00000355119 SLC9A2Q9UBY0 812 aa23.46■■□□□ 1.35
LIMS2-202ENST00000355119 KCNG1Q9UIX4 513 aa23.46■■□□□ 1.35
LIMS2-202ENST00000355119 LTBP3Q9NS15 1303 aa23.46■■□□□ 1.35
LIMS2-202ENST00000355119 DAPK3O43293 454 aa23.45■■□□□ 1.35
LIMS2-202ENST00000355119 HSD17B3P37058 310 aa23.45■■□□□ 1.35
LIMS2-202ENST00000355119 HMGCS2P54868 508 aa23.45■■□□□ 1.35
LIMS2-202ENST00000355119 GPD1LQ8N335 351 aa23.45■■□□□ 1.35
LIMS2-202ENST00000355119 RAB20Q9NX57 234 aa23.45■■□□□ 1.35
LIMS2-202ENST00000355119 FAM187AA6NFU0 413 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 HMGB1P1B2RPK0 211 aaPredicted RBP23.45■■□□□ 1.34
LIMS2-202ENST00000355119 RGS20O76081 388 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 GNGT1P63211 74 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 FMO1Q01740 532 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 TMEM132BQ14DG7 1078 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 GNPTABQ3T906 1256 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 BRDTQ58F21 947 aaPredicted RBP23.45■■□□□ 1.34
LIMS2-202ENST00000355119 MIS18BP1Q6P0N0 1132 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 ENOSF1Q7L5Y1 443 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 SLC47A2Q86VL8 602 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 PROCA1Q8NCQ7 364 aaPredicted RBP23.45■■□□□ 1.34
LIMS2-202ENST00000355119 ALG3Q92685 438 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 FAM81BQ96LP2 452 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 ZSWIM1Q9BR11 485 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 TEX13BQ9BXU2 312 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 WNT8AQ9H1J5 351 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 NEUROG2Q9H2A3 272 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.45■■□□□ 1.34
LIMS2-202ENST00000355119 CYP39A1Q9NYL5 469 aa23.45■■□□□ 1.34
LIMS2-202ENST00000355119 SEPT9Q9UHD8 586 aaPredicted RBP23.45■■□□□ 1.34
LIMS2-202ENST00000355119 GOLGA6L10A6NI86 522 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 SPATA31C2B4DYI2 1134 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 FZD9O00144 591 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 CYP1A2P05177 515 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 CYP11B1P15538 503 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 PDE6CP51160 858 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 CDR2Q01850 454 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 DHX34Q14147 1143 aaKnown RBP23.44■■□□□ 1.34
LIMS2-202ENST00000355119 EMC10Q5UCC4 262 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 NAA35Q5VZE5 725 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 KDM7AQ6ZMT4 941 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 CATSPERGQ6ZRH7 1159 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 ATP6V1G3Q96LB4 118 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 CYP26B1Q9NR63 512 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 WDR81Q562E7 1941 aa23.44■■□□□ 1.34
LIMS2-202ENST00000355119 TMEM110-MUSTN1A8MSY1 372 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 EIF3HO15372 352 aaKnown RBP eCLIP23.43■■□□□ 1.34
LIMS2-202ENST00000355119 ZC3H11AO75152 810 aaKnown RBP eCLIP23.43■■□□□ 1.34
LIMS2-202ENST00000355119 GGPS1O95749 300 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 MMEP08473 750 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 ACTR2P61160 394 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 DR1Q01658 176 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 PRKCEQ02156 737 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 ZNF211Q13398 564 aaPredicted RBP23.43■■□□□ 1.34
LIMS2-202ENST00000355119 FOXR1Q6PIV2 292 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 ABHD15Q6UXT9 468 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 TAS1R2Q8TE23 839 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 POP1Q99575 1024 aaKnown RBP23.43■■□□□ 1.34
LIMS2-202ENST00000355119 CELF4Q9BZC1 486 aaKnown RBP23.43■■□□□ 1.34
LIMS2-202ENST00000355119 XPNPEP1Q9NQW7 623 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.43■■□□□ 1.34
LIMS2-202ENST00000355119 TMOD4Q9NZQ9 345 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 TULP1O00294 542 aaPredicted RBP23.43■■□□□ 1.34
LIMS2-202ENST00000355119 HNRNPDLO14979 420 aaKnown RBP23.43■■□□□ 1.34
LIMS2-202ENST00000355119 ZBTB7AO95365 584 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 SOX10P56693 466 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 CEP85LQ5SZL2 805 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 BICD1Q96G01 975 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 POLR3FQ9H1D9 316 aaPredicted RBP23.43■■□□□ 1.34
LIMS2-202ENST00000355119 TMBIM4Q9HC24 238 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 KIAA1586Q9HCI6 787 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 TOPORSQ9NS56 1045 aaPredicted RBP23.43■■□□□ 1.34
LIMS2-202ENST00000355119 NR2E1Q9Y466 385 aa23.43■■□□□ 1.34
LIMS2-202ENST00000355119 ADGRA3Q8IWK6 1321 aa23.42■■□□□ 1.34
LIMS2-202ENST00000355119 FAM170AA1A519 330 aa23.42■■□□□ 1.34
LIMS2-202ENST00000355119 TULP2O00295 520 aa23.42■■□□□ 1.34
LIMS2-202ENST00000355119 MESDQ14696 234 aa23.42■■□□□ 1.34
LIMS2-202ENST00000355119 XKR3Q5GH77 459 aa23.42■■□□□ 1.34
LIMS2-202ENST00000355119 KCTD16Q68DU8 428 aa23.42■■□□□ 1.34
LIMS2-202ENST00000355119 SV2AQ7L0J3 742 aa23.42■■□□□ 1.34
LIMS2-202ENST00000355119 CCDC60Q8IWA6 550 aaPredicted RBP23.42■■□□□ 1.34
LIMS2-202ENST00000355119 SH2D3CQ8N5H7 860 aa23.42■■□□□ 1.34
LIMS2-202ENST00000355119 A1CFQ9NQ94 594 aaKnown RBP23.42■■□□□ 1.34
LIMS2-202ENST00000355119 ARHGAP28Q9P2N2 729 aa23.42■■□□□ 1.34
LIMS2-202ENST00000355119 UVRAGQ9P2Y5 699 aa23.42■■□□□ 1.34
LIMS2-202ENST00000355119 GTF3C4Q9UKN8 822 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms