RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 A6NJR5 290 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 USP17L12C9JPN9 530 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 USP17L21D6R901 530 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 EXOC3O60645 756 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 HNRNPCL1O60812 293 aaKnown RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 CCDC22O60826 627 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 ITGA2BP08514 1039 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 COILP38432 576 aaPredicted RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 KCNJ1P48048 391 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 MARCKSL1P49006 195 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 DYNLL1P63167 89 aaKnown RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 NONOQ15233 471 aaKnown RBP eCLIP8.39□□□□□ -1.07
CD46-203ENST00000354848 SLC35G1Q2M3R5 365 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 SLC45A4Q5BKX6 768 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 GJB7Q6PEY0 223 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 NLRP9Q7RTR0 991 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 CLNKQ7Z7G1 428 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 NEK8Q86SG6 692 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 MTDHQ86UE4 582 aaKnown RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 SMC1BQ8NDV3 1235 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 NAT14Q8WUY8 206 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 CTNNBL1Q8WYA6 563 aaPredicted RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 LZICQ8WZA0 190 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 KRT35Q92764 455 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 STMN2Q93045 179 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 LENG1Q96BZ8 264 aaPredicted RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 DYDC2Q96IM9 177 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 OLFM3Q96PB7 478 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 POP1Q99575 1024 aaKnown RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 BTBD10Q9BSF8 475 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 BRIP1Q9BX63 1249 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 KCTD10Q9H3F6 313 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 WASF2Q9Y6W5 498 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 TRPM3Q9HCF6 1732 aaPredicted RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 CICQ96RK0 1608 aaPredicted RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 TCRBV7S2A1N4TA0A589 114 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 POTEMA6NI47 508 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 CYTH3O43739 400 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 TCEA3O75764 348 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 GFPT2O94808 682 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 PABPC4Q13310 644 aaKnown RBP eCLIP8.39□□□□□ -1.07
CD46-203ENST00000354848 SH2D4BQ5SQS7 431 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 SPATA24Q86W54 205 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 HOMEZQ8IX15 550 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 SLX1AQ9BQ83 275 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 YIPF2Q9BWQ6 316 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 SPZ1Q9BXG8 430 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 SIX2Q9NPC8 291 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 DNAJC17Q9NVM6 304 aaKnown RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 IL1RAPL1Q9NZN1 696 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 COG5Q9UP83 839 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 CHMP2BQ9UQN3 213 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 ACTL7BQ9Y614 415 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 KCPQ6ZWJ8 1503 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 RASA4BC9J798 803 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 RASA4O43374 803 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 CDH16O75309 829 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 PABPC4LP0CB38 370 aaKnown RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 MUTP22033 750 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 TTLL12Q14166 644 aaPredicted RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 MAP7Q14244 749 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 DAB2IPQ5VWQ8 1189 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 RGS9BPQ6ZS82 235 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 KRT25Q7Z3Z0 450 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 ZC3H3Q8IXZ2 948 aaKnown RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 ANKRD35Q8N283 1001 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 RIBC1Q8N443 379 aaPredicted RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 SCFD1Q8WVM8 642 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 DDX27Q96GQ7 796 aaKnown RBP8.39□□□□□ -1.07
CD46-203ENST00000354848 LRRC27Q9C0I9 530 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 GRID1Q9ULK0 1009 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 ALG6Q9Y672 507 aa8.39□□□□□ -1.07
CD46-203ENST00000354848 CACNA1SQ13698 1873 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 C2CD2LO14523 706 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 SPAG7O75391 227 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 OATP04181 439 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 VAV1P15498 845 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 CHRNB2P17787 502 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 NR2F2P24468 414 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 RPL13P26373 211 aaKnown RBP8.38□□□□□ -1.07
CD46-203ENST00000354848 DSG1Q02413 1049 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 PPP2R5CQ13362 524 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 DDB1Q16531 1140 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 CYP1B1Q16678 543 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 RHBDF2Q6PJF5 856 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 IZUMO2Q6UXV1 221 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 TBCKQ8TEA7 893 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 SNX29Q8TEQ0 813 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 AGBL1Q96MI9 1066 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 MTMR9Q96QG7 549 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 THAP2Q9H0W7 228 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 UBN1Q9NPG3 1134 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 CYLDQ9NQC7 956 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 MAD2L2Q9UI95 211 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 PCDHA2Q9Y5H9 948 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 LAMB1P07942 1786 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 A0A1W2PRG0 241 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 TSPY2A6NKD2 308 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 PLSCR1O15162 318 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 GYG2O15488 501 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms