RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 FNIP2Q9P278 1114 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 ANKRD11Q6UB99 2663 aaPredicted RBP17.75■□□□□ 0.43
DDX55-202ENST00000354291 CEP295Q9C0D2 2601 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 ARL5CA6NH57 179 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 MSH4O15457 936 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 CCL16O15467 120 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 GDF9O60383 454 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 MAFO75444 373 aaPredicted RBP17.74■□□□□ 0.43
DDX55-202ENST00000354291 RETP07949 1114 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 NCLP19338 710 aaKnown RBP17.74■□□□□ 0.43
DDX55-202ENST00000354291 HOXA11P31270 313 aaPredicted RBP17.74■□□□□ 0.43
DDX55-202ENST00000354291 SFNP31947 248 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 RPS9P46781 194 aaKnown RBP17.74■□□□□ 0.43
DDX55-202ENST00000354291 JAK3P52333 1124 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 SGMS1Q86VZ5 419 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 RABGGTAQ92696 567 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 RNF39Q9H2S5 420 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 IFT122Q9HBG6 1241 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 SEMA4GQ9NTN9 838 aa17.74■□□□□ 0.43
DDX55-202ENST00000354291 MRPS17Q9Y2R5 130 aaKnown RBP17.74■□□□□ 0.43
DDX55-202ENST00000354291 CDC45O75419 566 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 CIITAP33076 1130 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 MLH1P40692 756 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 SCNN1GP51170 649 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 ADCY1Q08828 1119 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 FZD5Q13467 585 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 TSGA10IPQ3SY00 556 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 PPM1LQ5SGD2 360 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 LIN9Q5TKA1 542 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 LRCH2Q5VUJ6 765 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 FUT10Q6P4F1 479 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 APOA5Q6Q788 366 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 PRSS55Q6UWB4 352 aaPredicted RBP17.73■□□□□ 0.43
DDX55-202ENST00000354291 MIER3Q7Z3K6 550 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 SKAP1Q86WV1 359 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 REXO1Q8N1G1 1221 aaKnown RBP17.73■□□□□ 0.43
DDX55-202ENST00000354291 SMG8Q8ND04 991 aaKnown RBP17.73■□□□□ 0.43
DDX55-202ENST00000354291 LENG9Q96B70 501 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 ZFP42Q96MM3 310 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 RIT2Q99578 217 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 TEKT3Q9BXF9 490 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 MINDY3Q9H8M7 445 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 C6orf50Q9HD87 102 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 HEBP1Q9NRV9 189 aa17.73■□□□□ 0.43
DDX55-202ENST00000354291 NDRG2Q9UN36 371 aaKnown RBP17.73■□□□□ 0.43
DDX55-202ENST00000354291 MYH15Q9Y2K3 1946 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 ZBTB43O43298 467 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 TADA2AO75478 443 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 STBD1O95210 358 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 DSC1Q08554 894 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 N4BP2L1Q5TBK1 243 aaPredicted RBP17.72■□□□□ 0.43
DDX55-202ENST00000354291 PRR23CQ6ZRP0 262 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 CNNM3Q8NE01 707 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 CCDC136Q96JN2 1154 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 MBOAT7Q96N66 472 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 APOL6Q9BWW8 343 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 HES2Q9Y543 173 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 IPPQ9Y573 584 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 COL4A3BPQ9Y5P4 624 aa17.72■□□□□ 0.43
DDX55-202ENST00000354291 FASNP49327 2511 aaKnown RBP17.71■□□□□ 0.43
DDX55-202ENST00000354291 LRP3O75074 770 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 XYLBO75191 536 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 C8AP07357 584 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 HNRNPA1P09651 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDX55-202ENST00000354291 EXOSC10Q01780 885 aaKnown RBP17.71■□□□□ 0.43
DDX55-202ENST00000354291 CREMQ03060 361 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 KRT32Q14532 448 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 PPP2R5DQ14738 602 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 IL31Q6EBC2 164 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 DHX32Q7L7V1 743 aaKnown RBP17.71■□□□□ 0.43
DDX55-202ENST00000354291 SRGAP1Q7Z6B7 1085 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 PRPF31Q8WWY3 499 aaKnown RBP17.71■□□□□ 0.43
DDX55-202ENST00000354291 ING5Q8WYH8 240 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 DDX1Q92499 740 aaKnown RBP17.71■□□□□ 0.43
DDX55-202ENST00000354291 SLC5A5Q92911 643 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 JPH2Q9BR39 696 aaPredicted RBP17.71■□□□□ 0.43
DDX55-202ENST00000354291 EIF2AQ9BY44 585 aaKnown RBP17.71■□□□□ 0.43
DDX55-202ENST00000354291 PLA2G2FQ9BZM2 168 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 BRPF3Q9ULD4 1205 aa17.71■□□□□ 0.43
DDX55-202ENST00000354291 MTCL1Q9Y4B5 1905 aaKnown RBP17.7■□□□□ 0.42
DDX55-202ENST00000354291 PATJQ8NI35 1801 aa17.7■□□□□ 0.42
DDX55-202ENST00000354291 F5P12259 2224 aa17.7■□□□□ 0.42
DDX55-202ENST00000354291 HMGB1P09429 215 aaKnown RBP17.7■□□□□ 0.42
DDX55-202ENST00000354291 SIM2Q14190 667 aaPredicted RBP17.7■□□□□ 0.42
DDX55-202ENST00000354291 CSRP2Q16527 193 aa17.7■□□□□ 0.42
DDX55-202ENST00000354291 PFKFB3Q16875 520 aaPredicted RBP17.7■□□□□ 0.42
DDX55-202ENST00000354291 PLA2G4FQ68DD2 849 aa17.7■□□□□ 0.42
DDX55-202ENST00000354291 TMEM143Q96AN5 459 aa17.7■□□□□ 0.42
DDX55-202ENST00000354291 MCRS1Q96EZ8 462 aa17.7■□□□□ 0.42
DDX55-202ENST00000354291 ZMYND12Q9H0C1 365 aa17.7■□□□□ 0.42
DDX55-202ENST00000354291 HCFC1R1Q9NWW0 138 aa17.7■□□□□ 0.42
DDX55-202ENST00000354291 FBXW11Q9UKB1 542 aa17.7■□□□□ 0.42
DDX55-202ENST00000354291 ADAM28Q9UKQ2 775 aa17.7■□□□□ 0.42
DDX55-202ENST00000354291 NAP1L2Q9ULW6 460 aaPredicted RBP17.7■□□□□ 0.42
DDX55-202ENST00000354291 ZZEF1O43149 2961 aa17.7■□□□□ 0.42
DDX55-202ENST00000354291 ZFYVE26Q68DK2 2539 aa17.69■□□□□ 0.42
DDX55-202ENST00000354291 ASPMQ8IZT6 3477 aa17.69■□□□□ 0.42
DDX55-202ENST00000354291 GOLGA8AA7E2F4 631 aa17.69■□□□□ 0.42
DDX55-202ENST00000354291 GOLGA8BA8MQT2 603 aa17.69■□□□□ 0.42
DDX55-202ENST00000354291 TDGF1P13385 188 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms