RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 PCDHA10Q9Y5I2 948 aa10.79□□□□□ -0.68
MRPL55-204ENST00000348259 SPTBN2O15020 2390 aa10.79□□□□□ -0.68
MRPL55-204ENST00000348259 MIA3Q5JRA6 1907 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 CHD6Q8TD26 2715 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 NARSO43776 548 aaKnown RBP10.78□□□□□ -0.68
MRPL55-204ENST00000348259 ZSCAN20P17040 1043 aaPredicted RBP10.78□□□□□ -0.68
MRPL55-204ENST00000348259 LONP1P36776 959 aaKnown RBP10.78□□□□□ -0.68
MRPL55-204ENST00000348259 SETQ01105 290 aaPredicted RBP10.78□□□□□ -0.68
MRPL55-204ENST00000348259 CAMK4Q16566 473 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 INF2Q27J81 1249 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 PPP4R3AQ6IN85 833 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 POTEGQ6S5H5 508 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 TMC5Q6UXY8 1006 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 NEK8Q86SG6 692 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 ABI1Q8IZP0 508 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 CLIC6Q96NY7 704 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 MAP7D2Q96T17 732 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 SEMA4AQ9H3S1 761 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 CHST12Q9NRB3 414 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 GABBR1Q9UBS5 961 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 DNAJB4Q9UDY4 337 aa10.78□□□□□ -0.68
MRPL55-204ENST00000348259 ARID2Q68CP9 1835 aa10.77□□□□□ -0.68
MRPL55-204ENST00000348259 CARNS1A5YM72 827 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 WNT7AO00755 349 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 CSDE1O75534 798 aaKnown RBP10.77□□□□□ -0.69
MRPL55-204ENST00000348259 OFD1O75665 1012 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 OATP04181 439 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 PSAPP07602 524 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 CNPP09543 421 aaKnown RBP10.77□□□□□ -0.69
MRPL55-204ENST00000348259 GCFC2P16383 781 aaKnown RBP10.77□□□□□ -0.69
MRPL55-204ENST00000348259 ATP2B1P20020 1258 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 MCM7P33993 719 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 SLC11A1P49279 550 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 ALDH7A1P49419 539 aaKnown RBP10.77□□□□□ -0.69
MRPL55-204ENST00000348259 USP11P51784 963 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 PRKCEQ02156 737 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 TYRO3Q06418 890 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 LETM2Q2VYF4 491 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 JAKMIP3Q5VZ66 844 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 SASS6Q6UVJ0 657 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 MOXD1Q6UVY6 613 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 CCDC149Q6ZUS6 474 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 OTOP3Q7RTS5 596 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 FLCNQ8NFG4 579 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 TBCKQ8TEA7 893 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 LPPQ93052 612 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 ZNF668Q96K58 619 aaPredicted RBP10.77□□□□□ -0.69
MRPL55-204ENST00000348259 AK8Q96MA6 479 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 KLHL5Q96PQ7 755 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 ZNF577Q9BSK1 485 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 CSRNP2Q9H175 543 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 MFSD1Q9H3U5 465 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 DLL3Q9NYJ7 618 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 KIAA1468Q9P260 1216 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 IGSF9Q9P2J2 1179 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 EPS15L1Q9UBC2 864 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 WNT16Q9UBV4 365 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 HOOK1Q9UJC3 728 aaKnown RBP10.77□□□□□ -0.69
MRPL55-204ENST00000348259 AKT3Q9Y243 479 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 TDRD15B5MCY1 1934 aaKnown RBP10.77□□□□□ -0.69
MRPL55-204ENST00000348259 CFAP47Q6ZTR5 3102 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 NOTCH4Q99466 2003 aa10.77□□□□□ -0.69
MRPL55-204ENST00000348259 CHD8Q9HCK8 2581 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 USP24Q9UPU5 2620 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 COL4A3Q01955 1670 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 CYP3A7-CYP3A51PA0A087WV96 503 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 WDR64B1ANS9 1081 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 ZC3H11AO75152 810 aaKnown RBP eCLIP10.76□□□□□ -0.69
MRPL55-204ENST00000348259 DDHD2O94830 711 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 LMNAP02545 664 aaKnown RBP10.76□□□□□ -0.69
MRPL55-204ENST00000348259 CYP3A7P24462 503 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 TMOD1P28289 359 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 AFF1P51825 1210 aaKnown RBP10.76□□□□□ -0.69
MRPL55-204ENST00000348259 DTHD1Q6ZMT9 781 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 AGMOQ6ZNB7 445 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 KRBA2Q6ZNG9 492 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 MRPL10Q7Z7H8 261 aaKnown RBP10.76□□□□□ -0.69
MRPL55-204ENST00000348259 CABP7Q86V35 215 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 PPFIBP1Q86W92 1011 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 ZNF280BQ86YH2 543 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 CKAP2LQ8IYA6 745 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 SIX5Q8N196 739 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 RNF169Q8NCN4 708 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 ZNF707Q96C28 371 aaPredicted RBP10.76□□□□□ -0.69
MRPL55-204ENST00000348259 ACSF2Q96CM8 615 aaPredicted RBP10.76□□□□□ -0.69
MRPL55-204ENST00000348259 CCDC34Q96HJ3 373 aa10.76□□□□□ -0.69
MRPL55-204ENST00000348259 NIFKQ9BYG3 293 aaKnown RBP10.76□□□□□ -0.69
MRPL55-204ENST00000348259 WDR6Q9NNW5 1121 aaKnown RBP10.76□□□□□ -0.69
MRPL55-204ENST00000348259 MAP1BP46821 2468 aaKnown RBP10.75□□□□□ -0.69
MRPL55-204ENST00000348259 INPPL1O15357 1258 aa10.75□□□□□ -0.69
MRPL55-204ENST00000348259 MSH4O15457 936 aa10.75□□□□□ -0.69
MRPL55-204ENST00000348259 ZNF76P36508 570 aa10.75□□□□□ -0.69
MRPL55-204ENST00000348259 GRIN1Q05586 938 aa10.75□□□□□ -0.69
MRPL55-204ENST00000348259 PDIA5Q14554 519 aa10.75□□□□□ -0.69
MRPL55-204ENST00000348259 IL17AQ16552 155 aa10.75□□□□□ -0.69
MRPL55-204ENST00000348259 LONRF3Q496Y0 759 aa10.75□□□□□ -0.69
MRPL55-204ENST00000348259 NOMO2Q5JPE7 1267 aa10.75□□□□□ -0.69
MRPL55-204ENST00000348259 NT5DC1Q5TFE4 455 aa10.75□□□□□ -0.69
MRPL55-204ENST00000348259 PHLDB3Q6NSJ2 640 aa10.75□□□□□ -0.69
MRPL55-204ENST00000348259 CYP26C1Q6V0L0 522 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms