RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SPOPO43791 374 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 EDIL3O43854 480 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 ETS2P15036 469 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 HSPA6P17066 643 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 STAT3P40763 770 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 KCNA1Q09470 495 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 KPNB1Q14974 876 aaKnown RBP16.4■□□□□ 0.22
LMNA-201ENST00000347559 CERKLQ49MI3 558 aaPredicted RBP16.4■□□□□ 0.22
LMNA-201ENST00000347559 ZNF34Q8IZ26 560 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 PPFIBP2Q8ND30 876 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 IFT43Q96FT9 208 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 DCTN4Q9UJW0 460 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 SUGT1Q9Y2Z0 365 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 POTEFA5A3E0 1075 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 TJP3O95049 919 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 NR3C1P04150 777 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 POTEIP0CG38 1075 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 CHRNB2P17787 502 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 ANXA13P27216 316 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 PABPC4Q13310 644 aaKnown RBP eCLIP16.4■□□□□ 0.221e-8■■■■□ 25.6
LMNA-201ENST00000347559 C12orf60Q5U649 245 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 POTEGQ6S5H5 508 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 POTEEQ6S8J3 1075 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 C4orf50Q6ZRC1 276 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 RNF207Q6ZRF8 634 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 MTDHQ86UE4 582 aaKnown RBP16.4■□□□□ 0.22
LMNA-201ENST00000347559 SPZ1Q9BXG8 430 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 UBN1Q9NPG3 1134 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 ZNF804BA4D1E1 1349 aa16.4■□□□□ 0.22
LMNA-201ENST00000347559 ALS2Q96Q42 1657 aa16.39■□□□□ 0.22
LMNA-201ENST00000347559 ANKRD62A6NC57 917 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 FAM47DPA6NHR8 397 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 GSTA2P09210 222 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 CYP19A1P11511 503 aaPredicted RBP16.39■□□□□ 0.21
LMNA-201ENST00000347559 CLUL1Q15846 466 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 SBK1Q52WX2 424 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 CMPK2Q5EBM0 449 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 KIAA0825Q8IV33 1275 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 SCYL3Q8IZE3 742 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 ATG4AQ8WYN0 398 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 HAS1Q92839 578 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 LZTS2Q9BRK4 669 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.39■□□□□ 0.212e-7■■■■■ 58.1
LMNA-201ENST00000347559 LMNAP02545 664 aaKnown RBP16.39■□□□□ 0.21
LMNA-201ENST00000347559 FTLP02792 175 aaPredicted RBP16.39■□□□□ 0.21
LMNA-201ENST00000347559 PTPN4P29074 926 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 ITGA8P53708 1063 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 LRRC74BQ6ZQY2 392 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 CAPN12Q6ZSI9 719 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 CYFIP1Q7L576 1253 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 DZIP1Q86YF9 867 aaKnown RBP16.39■□□□□ 0.21
LMNA-201ENST00000347559 SLC13A5Q86YT5 568 aaPredicted RBP16.39■□□□□ 0.21
LMNA-201ENST00000347559 SLC20A1Q8WUM9 679 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 STMN2Q93045 179 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 MIPEPQ99797 713 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 NPHS2Q9NP85 383 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 MAGEA13PA6NCF6 341 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 CLDN3O15551 220 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 CALUO43852 315 aaPredicted RBP16.39■□□□□ 0.21
LMNA-201ENST00000347559 EYA4O95677 639 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 RFC4P35249 363 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 MCL1Q07820 350 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 ZRSR2Q15696 482 aaKnown RBP16.39■□□□□ 0.21
LMNA-201ENST00000347559 HS2ST1Q7LGA3 356 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 C4orf33Q8N1A6 199 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 ANKRD35Q8N283 1001 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 STARD13Q9Y3M8 1113 aa16.39■□□□□ 0.21
LMNA-201ENST00000347559 MIF4GDA9UHW6 222 aaKnown RBP16.38■□□□□ 0.21
LMNA-201ENST00000347559 GCNT3O95395 438 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 ALAS1P13196 640 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 ACSBG2Q5FVE4 666 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 ARSHQ5FYA8 562 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 CCDC125Q86Z20 511 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 MCUR1Q96AQ8 359 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 DYDC2Q96IM9 177 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 SLC4A9Q96Q91 983 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 NINJ2Q9NZG7 142 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 hCG_2014768A0A024R1R8 64 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 WDR91A4D1P6 747 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 CFAP69A5D8W1 941 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 SIGLEC16A6NMB1 481 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 SFI1A8K8P3 1242 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 TBX10O75333 385 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 ADCY8P40145 1251 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 NKX1-1Q15270 411 aaPredicted RBP16.38■□□□□ 0.21
LMNA-201ENST00000347559 HP1BP3Q5SSJ5 553 aaPredicted RBP16.38■□□□□ 0.21
LMNA-201ENST00000347559 OLIG1Q8TAK6 271 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 OPTNQ96CV9 577 aa16.38■□□□□ 0.21
LMNA-201ENST00000347559 CADM1Q9BY67 442 aaKnown RBP16.38■□□□□ 0.21
LMNA-201ENST00000347559 USP17L5A8MUK1 530 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 POC1B-GALNT4F8VUJ3 575 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 MAP3K7O43318 606 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 CDH16O75309 829 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 HOXD13P35453 343 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 GIT2Q14161 759 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 SGO2Q562F6 1265 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 NLRP9Q7RTR0 991 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 VPS52Q8N1B4 723 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 DNAJC18Q9H819 358 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms