RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 PRELPP51888 382 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 NFIXQ14938 502 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 MMS22LQ6ZRQ5 1243 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 MTBPQ96DY7 904 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 APOL5Q9BWW9 433 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 ZMYND12Q9H0C1 365 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 MYOM2P54296 1465 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 FAM47EQ6ZV65 393 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 DDX42Q86XP3 938 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 MRFAP1L1Q96HT8 127 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 KLK14Q9P0G3 267 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 DNAJC12Q9UKB3 198 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 LRG1P02750 347 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 PADI6Q6TGC4 694 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 FOXP4Q8IVH2 680 aaPredicted RBP12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 RNF149Q8NC42 400 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 TMEM39BQ9GZU3 492 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 CPA4Q9UI42 421 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 POLRMTO00411 1230 aaKnown RBP12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 LAD1O00515 517 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 FGGP02679 453 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 KRT8P05787 483 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 TRIM32Q13049 653 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 HEATR6Q6AI08 1181 aaKnown RBP12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 FOXR1Q6PIV2 292 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 SCG3Q8WXD2 468 aaKnown RBP12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 TMEM143Q96AN5 459 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 DDX28Q9NUL7 540 aaKnown RBP12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 SLC25A13Q9UJS0 675 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 IKBKBO14920 756 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 CLEC10AQ8IUN9 316 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 ASZ1Q8WWH4 475 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 ZKSCAN4Q969J2 545 aaPredicted RBP12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 CENPTQ96BT3 561 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 DTNAQ9Y4J8 743 aa12.96□□□□□ -0.34
TRIOBP-202ENST00000344404 ABCA5Q8WWZ7 1642 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 POTEFA5A3E0 1075 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 LDHAP00338 332 aaKnown RBP12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 POTEIP0CG38 1075 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 AP1ARQ63HQ0 302 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 E4F1Q66K89 784 aaPredicted RBP12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 POTEGQ6S5H5 508 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 POTEEQ6S8J3 1075 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 SLC25A41Q8N5S1 370 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 TBC1D19Q8N5T2 526 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 SNX31Q8N9S9 440 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 FMO2Q99518 471 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 JRKLQ9Y4A0 524 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 CEP170Q5SW79 1584 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 MMP1P03956 469 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 JAK3P52333 1124 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 NCALDP61601 193 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 UBE3CQ15386 1083 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 TOGARAM2Q6ZUX3 1019 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 PARK7Q99497 189 aaKnown RBP12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 ACAD9Q9H845 621 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 ADAMTS1Q9UHI8 967 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 ARHGAP26Q9UNA1 814 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 AURKCQ9UQB9 309 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 NPHP3-ACAD11A0A0J9YXS1 232 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 MCAMP43121 646 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 ALDH1A3P47895 512 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 SFR1Q86XK3 245 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 PGBD4Q96DM1 585 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 DHTKD1Q96HY7 919 aaPredicted RBP12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 NARFQ9UHQ1 456 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 PPIEQ9UNP9 301 aaKnown RBP12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 PLXNC1O60486 1568 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 TRIM49BA6NDI0 452 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 SKAP2O75563 359 aaPredicted RBP12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 FBXW10Q5XX13 1052 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 MB21D1Q8N884 522 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 PYGBP11216 843 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 EFHC2Q5JST6 749 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 OSBP2Q969R2 916 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 MAGEB5Q9BZ81 275 aa12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 RRAGDQ9NQL2 400 aaPredicted RBP12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 APOBEC2Q9Y235 224 aaKnown RBP12.95□□□□□ -0.34
TRIOBP-202ENST00000344404 POTEB3A0JP26 581 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 TTLL13PA6NNM8 815 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 POTECB2RU33 542 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 GRAP2O75791 330 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 POTEBQ6S5H4 581 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 C11orf57Q6ZUT1 292 aaPredicted RBP12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 MYRIPQ8NFW9 859 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 NUP85Q9BW27 656 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 ADNPQ9H2P0 1102 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 MTMR6Q9Y217 621 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 P4HA2O15460 535 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 PDHA1P08559 390 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 SPATS2Q86XZ4 545 aaKnown RBP12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 KCNV2Q8TDN2 545 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 HES6Q96HZ4 224 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms