RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TEKT4Q8WW24 435 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 KAT2BQ92831 832 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 ANLNQ9NQW6 1124 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 NAGPAQ9UK23 515 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 RIC1Q4ADV7 1423 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 K7ERI5 159 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 EIF3DO15371 548 aaKnown RBP eCLIP11.6□□□□□ -0.55
RPL28-201ENST00000344063 SLC16A4O15374 487 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 HAUS5O94927 633 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 UBTFL6P0CB48 400 aaPredicted RBP11.6□□□□□ -0.55
RPL28-201ENST00000344063 SERPINB4P48594 390 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 EPHB1P54762 984 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 SURF1Q15526 300 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 MTERF2Q49AM1 385 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 MDH1BQ5I0G3 518 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 CENPKQ9BS16 269 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 ANGPTL2Q9UKU9 493 aa11.6□□□□□ -0.55
RPL28-201ENST00000344063 ATRNO75882 1429 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 MED7O43513 233 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 PHF2O75151 1096 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 MYBP10242 640 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 CYP11B2P19099 503 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 PLCB4Q15147 1175 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 ZNF354CQ86Y25 554 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 ANKRD36BP1Q96IX9 119 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 DUSP9Q99956 384 aaKnown RBP11.59□□□□□ -0.55
RPL28-201ENST00000344063 GINM1Q9NU53 330 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 UBE4BO95155 1302 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 UBR1Q8IWV7 1749 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 RCCD1A6NED2 376 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 GOLGA8RI6L899 631 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 RNF225M0QZC1 329 aaPredicted RBP11.59□□□□□ -0.55
RPL28-201ENST00000344063 FOXP2O15409 715 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 SORBS3O60504 671 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 NQO1P15559 274 aaKnown RBP11.59□□□□□ -0.55
RPL28-201ENST00000344063 CNGA1P29973 690 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 SFNP31947 248 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 YARSP54577 528 aaKnown RBP11.59□□□□□ -0.55
RPL28-201ENST00000344063 MTM1Q13496 603 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 ZNF772Q68DY9 489 aaPredicted RBP11.59□□□□□ -0.55
RPL28-201ENST00000344063 CREG2Q8IUH2 290 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 MSL3Q8N5Y2 521 aaKnown RBP11.59□□□□□ -0.55
RPL28-201ENST00000344063 EPS8L3Q8TE67 593 aaKnown RBP11.59□□□□□ -0.55
RPL28-201ENST00000344063 PYROXD1Q8WU10 500 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 ADPGKQ9BRR6 497 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 HERC5Q9UII4 1024 aaKnown RBP11.59□□□□□ -0.55
RPL28-201ENST00000344063 GINS2Q9Y248 185 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 SLIT3O75094 1523 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 FSBPO95073 299 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 KCNA3P22001 575 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 TFDP1Q14186 410 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 PRR5LQ6MZQ0 368 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 HAUS6Q7Z4H7 955 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 C4orf33Q8N1A6 199 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 AFAP1L2Q8N4X5 818 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 DNAJC9Q8WXX5 260 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 CDKL2Q92772 493 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 FAM118BQ9BPY3 351 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 CARD9Q9H257 536 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 UVRAGQ9P2Y5 699 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 PEAK1Q9H792 1746 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 NDUFB10O96000 172 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 MMP10P09238 476 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 GNAT1P11488 350 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 TARSP26639 723 aaKnown RBP11.59□□□□□ -0.55
RPL28-201ENST00000344063 BASP1P80723 227 aaKnown RBP11.59□□□□□ -0.55
RPL28-201ENST00000344063 C1orf146Q5VVC0 180 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 HHIPL2Q6UWX4 724 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 LRP10Q7Z4F1 713 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 FBXL13Q8NEE6 735 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 SPATA20Q8TB22 786 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 PRCCQ92733 491 aaPredicted RBP11.59□□□□□ -0.55
RPL28-201ENST00000344063 CAVIN3Q969G5 261 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 SNF8Q96H20 258 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 TRIM55Q9BYV6 548 aa11.59□□□□□ -0.55
RPL28-201ENST00000344063 DENND3A2RUS2 1198 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 TRIM72Q6ZMU5 477 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 BARGINQ6ZT62 677 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 TMEM35BQ8NCS4 154 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 SMC1BQ8NDV3 1235 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 CCDC124Q96CT7 223 aaKnown RBP11.58□□□□□ -0.56
RPL28-201ENST00000344063 TOM1L1O75674 476 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 MKRN3Q13064 507 aaKnown RBP11.58□□□□□ -0.56
RPL28-201ENST00000344063 GEN1Q17RS7 908 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 MOXD1Q6UVY6 613 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 JAMLQ86YT9 394 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 RHOT1Q8IXI2 618 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 EXOC8Q8IYI6 725 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 TPCN2Q8NHX9 752 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 ERP44Q9BS26 406 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 TIPINQ9BVW5 301 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 ZNF341Q9BYN7 854 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 MX2P20592 715 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 COPS2P61201 443 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 PSMC5P62195 406 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 TFAMQ00059 246 aaKnown RBP11.58□□□□□ -0.56
RPL28-201ENST00000344063 CUL3Q13618 768 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 KYNUQ16719 465 aa11.58□□□□□ -0.56
RPL28-201ENST00000344063 SWT1Q5T5J6 900 aaKnown RBP11.58□□□□□ -0.56
RPL28-201ENST00000344063 SYDE1Q6ZW31 735 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms