RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ARFGAP3Q9NP61 516 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 MYO16Q9Y6X6 1858 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 NFIBO00712 420 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PAPSS1O43252 624 aaPredicted RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PRKAB2O43741 272 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 ZNF862O60290 1169 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PECAM1P16284 738 aaPredicted RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PRPHP41219 470 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 KCNQ1P51787 676 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 DSG1Q02413 1049 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 SNW1Q13573 536 aaKnown RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 KARSQ15046 597 aaKnown RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 TCEAL1Q15170 157 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 ISM2Q6H9L7 571 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 SARM1Q6SZW1 724 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 RINLQ6ZS11 566 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 POTEDQ86YR6 584 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 HACE1Q8IYU2 909 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 CABS1Q96KC9 395 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 SPATA33Q96N06 139 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 YME1L1Q96TA2 773 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PCED1AQ9H1Q7 454 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 TPCN1Q9ULQ1 816 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PCDHB8Q9UN66 801 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 NFE2L3Q9Y4A8 694 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PCDHB13Q9Y5F0 798 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 EME2A4GXA9 379 aaPredicted RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 ANKRD65E5RJM6 399 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 IPO5O00410 1097 aaKnown RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 CHUKO15111 745 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 GFRA3O60609 400 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 LMNAP02545 664 aaKnown RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 NPR3P17342 541 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 ASIC1P78348 528 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 ITPRIPQ8IWB1 547 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 UCN2Q96RP3 112 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 ATP6V0A4Q9HBG4 840 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PDGFCQ9NRA1 345 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 CHST7Q9NS84 486 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 VPS18Q9P253 973 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 DMGDHQ9UI17 866 aaKnown RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 MRPL42Q9Y6G3 142 aaKnown RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 ATXN2Q99700 1313 aaKnown RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 C2orf71A6NGG8 1288 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 FGAP02671 866 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 IL9P15248 144 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PMLP29590 882 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PDE1AP54750 535 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 DSC1Q08554 894 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 APOBRQ0VD83 1088 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PDIA5Q14554 519 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 SHROOM1Q2M3G4 852 aaPredicted RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 TCTN1Q2MV58 587 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 FBXW10Q5XX13 1052 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 LMBR1Q8WVP7 490 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 DDX27Q96GQ7 796 aaKnown RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 SDF4Q9BRK5 362 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 TRIM5Q9C035 493 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 AGO4Q9HCK5 861 aaKnown RBP8.04□□□□□ -1.12
ZNF540-202ENST00000343599 COMMD8Q9NX08 183 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 PCDHB7Q9Y5E2 793 aa8.04□□□□□ -1.12
ZNF540-202ENST00000343599 ZNF213O14771 459 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 EPN2O95208 641 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 KIF4AO95239 1232 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 C22orf31O95567 290 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 CSRP1P21291 193 aaKnown RBP8.03□□□□□ -1.12
ZNF540-202ENST00000343599 CTNNB1P35222 781 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 BEX3Q00994 111 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 LRRC32Q14392 662 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 LILRA6Q6PI73 481 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 SYCE2Q6PIF2 218 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 LUZP1Q86V48 1076 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 DBF4BQ8NFT6 615 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 SLC5A5Q92911 643 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 RRP36Q96EU6 259 aaKnown RBP8.03□□□□□ -1.12
ZNF540-202ENST00000343599 MRFAP1L1Q96HT8 127 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 MMTAG2Q9BU76 263 aaKnown RBP8.03□□□□□ -1.12
ZNF540-202ENST00000343599 PPP1R12CQ9BZL4 782 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 CBX8Q9HC52 389 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 CACNA2D2Q9NY47 1150 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 H0Y626 953 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 MEIS2O14770 477 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 TRIM16O95361 564 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 ACRP10323 421 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 MCCD1P59942 119 aaPredicted RBP8.03□□□□□ -1.12
ZNF540-202ENST00000343599 PLCB4Q15147 1175 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 HFE2Q6ZVN8 426 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 DHX32Q7L7V1 743 aaKnown RBP8.03□□□□□ -1.12
ZNF540-202ENST00000343599 ECHDC2Q86YB7 292 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 MB21D2Q8IYB1 491 aaPredicted RBP8.03□□□□□ -1.12
ZNF540-202ENST00000343599 ENAHQ8N8S7 591 aaPredicted RBP8.03□□□□□ -1.12
ZNF540-202ENST00000343599 TMEM174Q8WUU8 243 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 HNRNPLLQ8WVV9 542 aaKnown RBP8.03□□□□□ -1.12
ZNF540-202ENST00000343599 ARNTL2Q8WYA1 636 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 TAAR1Q96RJ0 339 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 ZBED2Q9BTP6 218 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 ODF2LQ9ULJ1 636 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 ASB3Q9Y575 518 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 PCDHGA4Q9Y5G9 962 aa8.03□□□□□ -1.12
ZNF540-202ENST00000343599 CCP110O43303 1012 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms