RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 POLR3CQ9BUI4 534 aaPredicted RBP16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 TARS2Q9BW92 718 aaKnown RBP16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 LIMA1Q9UHB6 759 aaKnown RBP16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 NFU1Q9UMS0 254 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 PODXLO00592 558 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 RASGRF2O14827 1237 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 FTLP02792 175 aaPredicted RBP16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 DPYDQ12882 1025 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 SEPT6Q14141 434 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 TFDP2Q14188 446 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 IQCB1Q15051 598 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 VGLL2Q8N8G2 317 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 RAB3IPQ96QF0 476 aaPredicted RBP16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 TTC1Q99614 292 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 VCXQ9H320 206 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 SRGAP2O75044 1071 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 MOCS2O96007 188 aaPredicted RBP16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 CYP11B2P19099 503 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 THPOP40225 353 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 SLCO1A2P46721 670 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 NNTQ13423 1086 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 BBS9Q3SYG4 887 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 FAM102AQ5T9C2 384 aaPredicted RBP16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 PDIK1LQ8N165 341 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 RBM41Q96IZ5 413 aaKnown RBP16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 P2RX7Q99572 595 aaKnown RBP16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 IGSF9BQ9UPX0 1349 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 TJP3O95049 919 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 SREBF1P36956 1147 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 APPL2Q8NEU8 664 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 SYTL5Q8TDW5 730 aaPredicted RBP16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 EFCC1Q9HA90 598 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 TUBE1Q9UJT0 475 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 NCOA4Q13772 614 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 BTBD8Q5XKL5 378 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 RAPH1Q70E73 1250 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 GLYCTKQ8IVS8 523 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 KCTD17Q8N5Z5 321 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 SAMD3Q8N6K7 520 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 PDCD2LQ9BRP1 358 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 UBN1Q9NPG3 1134 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 CAPN11Q9UMQ6 739 aa16.04■□□□□ 0.16
PCDHB13-201ENST00000341948 ADCY1Q08828 1119 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 CDR2LQ86X02 465 aaPredicted RBP16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 ARRDC4Q8NCT1 418 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 CCDC197Q8NCU1 140 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 RIOX1Q9H6W3 641 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 CYP26B1Q9NR63 512 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 SMYD2Q9NRG4 433 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 EXOC1LA0A1B0GW35 172 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 SLC16A3O15427 465 aaKnown RBP16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 SSTR3P32745 418 aaPredicted RBP16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 ZNF449Q6P9G9 518 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 HEMGNQ9BXL5 484 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 PPP1R12CQ9BZL4 782 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 ARHGAP42A6NI28 874 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 CREB3O43889 395 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 PPATQ06203 517 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 THOC5Q13769 683 aaKnown RBP16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 SPATA2LQ8IUW3 424 aaPredicted RBP16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 IL17RBQ9NRM6 502 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 HEY1Q9Y5J3 304 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 FMR1Q06787 632 aaKnown RBP eCLIP16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 MAP7Q14244 749 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 PDXDC1Q6P996 788 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 TRIM72Q6ZMU5 477 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 TRIM42Q8IWZ5 723 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 CNOT10Q9H9A5 744 aaKnown RBP16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 LCMT1Q9UIC8 334 aa16.03■□□□□ 0.16
PCDHB13-201ENST00000341948 A0A1B0GTH6 734 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 CYP26A1O43174 497 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 NME3Q13232 169 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 NOTUMQ6P988 496 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 SIK2Q9H0K1 926 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 ASCC2Q9H1I8 757 aaPredicted RBP16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 VWA5AO00534 786 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 MT-ND3P03897 115 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 CYP2C8P10632 490 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 SOX5P35711 763 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 GRIK1P39086 918 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 MAP3K21Q5TCX8 1036 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 CENPUQ71F23 418 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 ZNF564Q8TBZ8 553 aaPredicted RBP16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 NUP85Q9BW27 656 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 PXMP2Q9NR77 195 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 SLC38A7Q9NVC3 462 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 PITPNM2Q9BZ72 1349 aa16.02■□□□□ 0.16
PCDHB13-201ENST00000341948 DCDC2CA8MYV0 355 aa16.02■□□□□ 0.15
PCDHB13-201ENST00000341948 MRPS25P82663 173 aaKnown RBP16.02■□□□□ 0.15
PCDHB13-201ENST00000341948 ZKSCAN8Q15776 578 aaPredicted RBP16.02■□□□□ 0.15
PCDHB13-201ENST00000341948 NOVA2Q9UNW9 492 aaKnown RBP16.02■□□□□ 0.15
PCDHB13-201ENST00000341948 USP27XA6NNY8 438 aa16.02■□□□□ 0.15
PCDHB13-201ENST00000341948 CD4P01730 458 aa16.02■□□□□ 0.15
PCDHB13-201ENST00000341948 NFKBIAP25963 317 aa16.02■□□□□ 0.15
PCDHB13-201ENST00000341948 OR1G1P47890 313 aa16.02■□□□□ 0.15
PCDHB13-201ENST00000341948 GRIN1Q05586 938 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms