RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 KCNMB3Q9NPA1 279 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 SEL1LQ9UBV2 794 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 MYO5AQ9Y4I1 1855 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 NFIBO00712 420 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 PYGMP11217 842 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 NEDD9Q14511 834 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 ANKMY2Q8IV38 441 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 ANKRD35Q8N283 1001 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 SMC6Q96SB8 1091 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 KLF6Q99612 283 aaPredicted RBP11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 CARD9Q9H257 536 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 PCSK1NQ9UHG2 260 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 YWHAGP61981 247 aaKnown RBP eCLIP11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 IL9RQ01113 521 aa11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 DHX34Q14147 1143 aaKnown RBP11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 FYB2Q5VWT5 728 aa11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 THNSL1Q8IYQ7 743 aa11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 TMEM143Q96AN5 459 aa11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 MCUR1Q96AQ8 359 aa11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 PWWP2AQ96N64 755 aa11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 FAM167BQ9BTA0 163 aa11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 PABPC3Q9H361 631 aaKnown RBP11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 ERVK-5Q9HDB9 667 aa11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.83□□□□□ -0.51
SEMA4D-201ENST00000339861 MYH6P13533 1939 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 K7ERI5 159 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 PIK3R2O00459 728 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 NOP56O00567 594 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 TLR3O15455 904 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 IRX4P78413 519 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 QPCTQ16769 361 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 PHLDB3Q6NSJ2 640 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 CASC4Q6P4E1 433 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 ZNF662Q6ZS27 426 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 VPS52Q8N1B4 723 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 TAS1R2Q8TE23 839 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 MAIP1Q8WWC4 291 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 ALG3Q92685 438 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 F5H423 210 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 GJB6O95452 261 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 PLS3P13797 630 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 RPL21P46778 160 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 ITGB3BPQ13352 177 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 IZUMO3Q5VZ72 239 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 OTOP1Q7RTM1 612 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 PRUNE1Q86TP1 453 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 ATP8B4Q8TF62 1192 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 POLR3CQ9BUI4 534 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 ZHX2Q9Y6X8 837 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 IGSF9BQ9UPX0 1349 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 TGFB1I1O43294 461 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 MYCNP04198 464 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 PPP3CAQ08209 521 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 GPS1Q13098 491 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 ZCWPW2Q504Y3 356 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 STRIP1Q5VSL9 837 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 SPOPLQ6IQ16 392 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 DNAJC24Q6P3W2 148 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 ARHGEF18Q6ZSZ5 1173 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 ATP6V0A1Q93050 837 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 ZSWIM1Q9BR11 485 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 WDR18Q9BV38 432 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 WNT8AQ9H1J5 351 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 ECT2Q9H8V3 914 aa11.83□□□□□ -0.52
SEMA4D-201ENST00000339861 MYH13Q9UKX3 1938 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 CNGA1P29973 690 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 SLC8A1P32418 973 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 COILP38432 576 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 ITGA8P53708 1063 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 CDO1Q16878 200 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 ANKRD20A3Q5VUR7 823 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 LLGL2Q6P1M3 1020 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 ARMC9Q7Z3E5 817 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 CDR2LQ86X02 465 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 SLC13A5Q86YT5 568 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 TATDN2Q93075 761 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 TAAR1Q96RJ0 339 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 MSTO1Q9BUK6 570 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 ETNK1Q9HBU6 452 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 CTNNAL1Q9UBT7 734 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 NWD2Q9ULI1 1742 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 INO80B-WBP1J3KQ70 363 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 PIAS1O75925 651 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 ASNSP08243 561 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 TMEM191BP0C7N4 346 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 ATP2A2P16615 1042 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 HOXA7P31268 230 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 DGKZQ13574 1117 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 RFX8Q6ZV50 586 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 EPM2AIP1Q7L775 607 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 CPNE8Q86YQ8 564 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 TTC16Q8NEE8 873 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 SLC7A3Q8WY07 619 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 KAT2BQ92831 832 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 GLIS2Q9BZE0 524 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 INO80BQ9C086 356 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 GINM1Q9NU53 330 aa11.82□□□□□ -0.52
SEMA4D-201ENST00000339861 GAKO14976 1311 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms