RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 ADKP55263 362 aaKnown RBP5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 PPP3CAQ08209 521 aa5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 MTF1Q14872 753 aa5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 GLE1Q53GS7 698 aaKnown RBP5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 ARMCX2Q7L311 632 aa5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 DYMQ7RTS9 669 aa5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 SRGAP1Q7Z6B7 1085 aa5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 ZNF397Q8NF99 534 aaPredicted RBP5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 KIF18AQ8NI77 898 aa5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 KAT2BQ92831 832 aa5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 WDR24Q96S15 920 aa5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 XYLT2Q9H1B5 865 aa5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 CYLDQ9NQC7 956 aa5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 SUCLA2Q9P2R7 463 aaPredicted RBP5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 PCDHA13Q9Y5I0 950 aa5.84□□□□□ -1.47
PRPF4B-201ENST00000337659 ACKR2O00590 384 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 RIOK3O14730 519 aaKnown RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 MAP2K7O14733 419 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 PPFIA4O75335 1185 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 PAPLNO95428 1278 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 CYP3A5P20815 502 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 LBX1P52954 281 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 ZNF571Q7Z3V5 609 aaPredicted RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 IFNL1Q8IU54 200 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 CREG2Q8IUH2 290 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 NME8Q8N427 588 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 MREGQ8N565 214 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 RABGGTAQ92696 567 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 MAP7D2Q96T17 732 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 BCCIPQ9P287 314 aaKnown RBP eCLIP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 GABBR1Q9UBS5 961 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 JRKLQ9Y4A0 524 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 TDRD15B5MCY1 1934 aaKnown RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 ADCY6O43306 1168 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 IL18RAPO95256 599 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 TNNT1P13805 278 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 STX17P56962 302 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 CENPCQ03188 943 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 PHF13Q86YI8 300 aaPredicted RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 TRIM58Q8NG06 486 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 KREMEN1Q96MU8 473 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 RPS6KC1Q96S38 1066 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 VPS16Q9H269 839 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 ABHD16BQ9H3Z7 469 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 NAGPAQ9UK23 515 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 DDX3XO00571 662 aaKnown RBP eCLIP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 PRPF6O94906 941 aaKnown RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 GH1P01241 217 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 CNGA1P29973 690 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 ATICP31939 592 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 ATP2B2Q01814 1243 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 MAP2K5Q13163 448 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 DMP1Q13316 513 aaPredicted RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 NNTQ13423 1086 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 PRPF4BQ13523 1007 aaKnown RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 PKDCCQ504Y2 493 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 TPH2Q8IWU9 490 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 CRIPAKQ8N1N5 446 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 SPC24Q8NBT2 197 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 PIGOQ8TEQ8 1089 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 PHACTR1Q9C0D0 580 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 LHX5Q9H2C1 402 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 NRBP2Q9NSY0 501 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 CNTN3Q9P232 1028 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 SNX12Q9UMY4 172 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 POTEB2H3BUK9 544 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 DDX3YO15523 660 aaKnown RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 LSM8O95777 96 aaKnown RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 POTEJP0CG39 1038 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 MYBL1P10243 752 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 ATP2B1P20020 1258 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 ZNF76P36508 570 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 AARSP49588 968 aaKnown RBP eCLIP5.83□□□□□ -1.489e-6■□□□□ 8.7
PRPF4B-201ENST00000337659 EXOC3L4Q17RC7 722 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 TRIM71Q2Q1W2 868 aaKnown RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 ZC2HC1CQ53FD0 456 aaPredicted RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 ODR4Q5SWX8 454 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 PLEKHH3Q7Z736 793 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 CTU1Q7Z7A3 348 aaKnown RBP5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 APBA2Q99767 749 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 TXLNGYQ9BZA5 131 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 VIPAS39Q9H9C1 493 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 SALL4Q9UJQ4 1053 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 C2CD2Q9Y426 696 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 PCDHA3Q9Y5H8 950 aa5.83□□□□□ -1.48
PRPF4B-201ENST00000337659 RRN3P2A6NIE6 340 aa5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 TOM1L1O75674 476 aa5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 SLU7O95391 586 aaKnown RBP5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 ERBB2P04626 1255 aa5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 TTLL4Q14679 1199 aa5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 SNRNP35Q16560 246 aaKnown RBP5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 SFMBT2Q5VUG0 894 aa5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 ISM2Q6H9L7 571 aa5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 TRIM72Q6ZMU5 477 aa5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 MRPL10Q7Z7H8 261 aaKnown RBP5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 NEK11Q8NG66 645 aa5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 EPS8L1Q8TE68 723 aa5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 ZNF518BQ9C0D4 1074 aa5.82□□□□□ -1.48
PRPF4B-201ENST00000337659 NEU2Q9Y3R4 380 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms