RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 MICAL3Q7RTP6 2002 aa16.82■□□□□ 0.28
SEC13-201ENST00000337354 A0A0B4J269 797 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 KIAA0391O15091 583 aaKnown RBP16.81■□□□□ 0.28
SEC13-201ENST00000337354 DGKIO75912 1065 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 UPP2O95045 317 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 ITGA4P13612 1032 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 GARTP22102 1010 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 HOXD13P35453 343 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 MATR3P43243 847 aaKnown RBP eCLIP16.81■□□□□ 0.28
SEC13-201ENST00000337354 MORC3Q14149 939 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 KLHL40Q2TBA0 621 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 SMG8Q8ND04 991 aaKnown RBP16.81■□□□□ 0.28
SEC13-201ENST00000337354 SYAP1Q96A49 352 aaPredicted RBP16.81■□□□□ 0.28
SEC13-201ENST00000337354 ZBTB45Q96K62 511 aaPredicted RBP16.81■□□□□ 0.28
SEC13-201ENST00000337354 RAD9AQ99638 391 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 CDT1Q9H211 546 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 ANKFY1Q9P2R3 1169 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 GIT1Q9Y2X7 761 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 INSL6Q9Y581 213 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 PTPRSQ13332 1948 aa16.81■□□□□ 0.28
SEC13-201ENST00000337354 ANKRD63C9JTQ0 380 aa16.8■□□□□ 0.28
SEC13-201ENST00000337354 PDXKO00764 312 aa16.8■□□□□ 0.28
SEC13-201ENST00000337354 LDHAP00338 332 aaKnown RBP16.8■□□□□ 0.28
SEC13-201ENST00000337354 GRM5P41594 1212 aa16.8■□□□□ 0.28
SEC13-201ENST00000337354 HTRA4P83105 476 aaPredicted RBP16.8■□□□□ 0.28
SEC13-201ENST00000337354 POU5F1Q01860 360 aaKnown RBP16.8■□□□□ 0.28
SEC13-201ENST00000337354 HSP90AA2PQ14568 343 aaPredicted RBP16.8■□□□□ 0.28
SEC13-201ENST00000337354 NOLC1Q14978 699 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■■■■■ 27.8
SEC13-201ENST00000337354 CCDC183Q5T5S1 534 aa16.8■□□□□ 0.28
SEC13-201ENST00000337354 SLC39A4Q6P5W5 647 aa16.8■□□□□ 0.28
SEC13-201ENST00000337354 NELFCDQ8IXH7 590 aa16.8■□□□□ 0.28
SEC13-201ENST00000337354 TMEM174Q8WUU8 243 aa16.8■□□□□ 0.28
SEC13-201ENST00000337354 CCDC94Q9BW85 323 aaPredicted RBP16.8■□□□□ 0.28
SEC13-201ENST00000337354 GDAQ9Y2T3 454 aa16.8■□□□□ 0.28
SEC13-201ENST00000337354 RBAK-RBAKDNI3L0D1 243 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 TGFB1I1O43294 461 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 TLL1O43897 1013 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 ATF7P17544 494 aaPredicted RBP16.79■□□□□ 0.28
SEC13-201ENST00000337354 SMAD3P84022 425 aaKnown RBP16.79■□□□□ 0.28
SEC13-201ENST00000337354 STIM1Q13586 685 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 GLB1LQ6UWU2 654 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 RBM43Q6ZSC3 357 aaKnown RBP16.79■□□□□ 0.28
SEC13-201ENST00000337354 ZBTB33Q86T24 672 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 ABI1Q8IZP0 508 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 RNF169Q8NCN4 708 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 POMGNT1Q8WZA1 660 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 ZNF689Q96CS4 500 aaPredicted RBP16.79■□□□□ 0.28
SEC13-201ENST00000337354 YME1L1Q96TA2 773 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 KANSL3Q9P2N6 904 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 AGO2Q9UKV8 859 aaKnown RBP16.79■□□□□ 0.28
SEC13-201ENST00000337354 TRAF3IP3Q9Y228 551 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 PCDHA11Q9Y5I1 949 aa16.79■□□□□ 0.28
SEC13-201ENST00000337354 ZMYM2Q9UBW7 1377 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 OGTO15294 1046 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 CLTAP09496 248 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 ADSSP30520 456 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 PRCPP42785 496 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 YARSP54577 528 aaKnown RBP16.78■□□□□ 0.28
SEC13-201ENST00000337354 MYBPC2Q14324 1141 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 RAB30Q15771 203 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 FAM109BQ6ICB4 259 aaPredicted RBP16.78■□□□□ 0.28
SEC13-201ENST00000337354 ARMCX5Q6P1M9 558 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 AGMOQ6ZNB7 445 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 C12orf56Q8IXR9 622 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 ADSSL1Q8N142 457 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 DHTKD1Q96HY7 919 aaPredicted RBP16.78■□□□□ 0.28
SEC13-201ENST00000337354 ACAP3Q96P50 834 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 MSTO1Q9BUK6 570 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 TMEM117Q9H0C3 514 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 KCTD10Q9H3F6 313 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 NXF3Q9H4D5 531 aaKnown RBP16.78■□□□□ 0.28
SEC13-201ENST00000337354 RSAD1Q9HA92 442 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 KIAA1586Q9HCI6 787 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 AGPAT3Q9NRZ7 376 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 TOPORSQ9NS56 1045 aaPredicted RBP16.78■□□□□ 0.28
SEC13-201ENST00000337354 TYW1Q9NV66 732 aaKnown RBP16.78■□□□□ 0.28
SEC13-201ENST00000337354 SNTG2Q9NY99 539 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 HES2Q9Y543 173 aa16.78■□□□□ 0.28
SEC13-201ENST00000337354 BIN1O00499 593 aa16.77■□□□□ 0.28
SEC13-201ENST00000337354 CALUO43852 315 aaPredicted RBP16.77■□□□□ 0.28
SEC13-201ENST00000337354 OFD1O75665 1012 aa16.77■□□□□ 0.28
SEC13-201ENST00000337354 LETM1O95202 739 aaPredicted RBP16.77■□□□□ 0.28
SEC13-201ENST00000337354 IBSPP21815 317 aaPredicted RBP16.77■□□□□ 0.28
SEC13-201ENST00000337354 ISM2Q6H9L7 571 aa16.77■□□□□ 0.28
SEC13-201ENST00000337354 FAM117BQ6P1L5 589 aa16.77■□□□□ 0.28
SEC13-201ENST00000337354 TMCO2Q7Z6W1 182 aaPredicted RBP16.77■□□□□ 0.28
SEC13-201ENST00000337354 THNSL1Q8IYQ7 743 aa16.77■□□□□ 0.28
SEC13-201ENST00000337354 CMTR2Q8IYT2 770 aaKnown RBP16.77■□□□□ 0.28
SEC13-201ENST00000337354 HAPLN2Q9GZV7 340 aa16.77■□□□□ 0.28
SEC13-201ENST00000337354 RNF39Q9H2S5 420 aa16.77■□□□□ 0.28
SEC13-201ENST00000337354 PLEKHA5Q9HAU0 1116 aa16.77■□□□□ 0.28
SEC13-201ENST00000337354 PARP2Q9UGN5 583 aa16.77■□□□□ 0.28
SEC13-201ENST00000337354 MSRAQ9UJ68 235 aa16.77■□□□□ 0.28
SEC13-201ENST00000337354 MAPK8IP1Q9UQF2 711 aa16.77■□□□□ 0.28
SEC13-201ENST00000337354 GRXCR1A8MXD5 290 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 TISP43B9A030 160 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 PSMA7O14818 248 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 INPPL1O15357 1258 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 FGFR1P11362 822 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 HARSP12081 509 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms