RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 DOK7Q18PE1 504 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 KIAA1755Q5JYT7 1200 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 E4F1Q66K89 784 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 PCSK1NQ9UHG2 260 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 TMA7Q9Y2S6 64 aaKnown RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 MTO1Q9Y2Z2 717 aaKnown RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 NPC1L1Q9UHC9 1359 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 NQO1P15559 274 aaKnown RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 OSBPP22059 807 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 SCNN1DP51172 638 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 WASHC5Q12768 1159 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 RRM2BQ7LG56 351 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 MICU2Q8IYU8 434 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 ZNF786Q8N393 782 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 DDI1Q8WTU0 396 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 MTERF3Q96E29 417 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 ZBED2Q9BTP6 218 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 MSTO1Q9BUK6 570 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 TRIM45Q9H8W5 580 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 C6orf203Q9P0P8 240 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 LIMA1Q9UHB6 759 aaKnown RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 DGKIO75912 1065 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 DYNLL1P63167 89 aaKnown RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 KRT33BQ14525 404 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 MTERF2Q49AM1 385 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 WLSQ5T9L3 541 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 C1orf228Q6PIY5 440 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 GJB4Q9NTQ9 266 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 DTNAQ9Y4J8 743 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 GSNP06396 782 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 PTK2BQ14289 1009 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 ANO4Q32M45 955 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 IYDQ6PHW0 289 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 EGFL8Q99944 293 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 NSMCE4AQ9NXX6 385 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 IP6K2Q9UHH9 426 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 LCMT1Q9UIC8 334 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 HERC5Q9UII4 1024 aaKnown RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 LINC00854A0A1B0GVQ3 168 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 BNIP3LO60238 219 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 KLHL2O95198 593 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 NR3C1P04150 777 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 SLC9A1P19634 815 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 EIF2B2P49770 351 aaKnown RBP10.35□□□□□ -0.75
COL4A6-201ENST00000334504 FBXW4P57775 412 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 LVRNQ6Q4G3 990 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 TMC4Q7Z404 712 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 RNF139Q8WU17 664 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 SGSM3Q96HU1 749 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 ABHD8Q96I13 439 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 POLIQ9UNA4 740 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 FAM47DPA6NHR8 397 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 KCNQ3O43525 872 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 CALB1P05937 261 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 PDHBP11177 359 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 ST13P50502 369 aaKnown RBP10.35□□□□□ -0.75
COL4A6-201ENST00000334504 NAALADL2Q58DX5 795 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 ARHGAP22Q7Z5H3 698 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 DPF2Q92785 391 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 INTS2Q9H0H0 1204 aaKnown RBP10.35□□□□□ -0.75
COL4A6-201ENST00000334504 PAPOLBQ9NRJ5 636 aaKnown RBP10.35□□□□□ -0.75
COL4A6-201ENST00000334504 E5RI56 91 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 PRKAB2O43741 272 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 CDC27P30260 824 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 GCLMP48507 274 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 ABCE1P61221 599 aaKnown RBP10.35□□□□□ -0.75
COL4A6-201ENST00000334504 FAM182BQ5T319 152 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 PROM2Q8N271 834 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 PUS3Q9BZE2 481 aaKnown RBP10.35□□□□□ -0.75
COL4A6-201ENST00000334504 MAD2L2Q9UI95 211 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 ATP8B3O60423 1300 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 F8W8V4 182 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 HSPA13P48723 471 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 ALCAMQ13740 583 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 DRAP1Q14919 205 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-201ENST00000334504 HEATR6Q6AI08 1181 aaKnown RBP10.35□□□□□ -0.75
COL4A6-201ENST00000334504 SPICE1Q8N0Z3 855 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 VPS50Q96JG6 964 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 PPP1R16BQ96T49 567 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 VCPKMTQ9H867 229 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 MCM8Q9UJA3 840 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 LRFN2Q9ULH4 789 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 TMEM120BA0PK00 339 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 ZNF263O14978 683 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 ABCD1P33897 745 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 ABCB5Q2M3G0 1257 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 SYCP2LQ5T4T6 812 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 DNAJC10Q8IXB1 793 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 ZNF496Q96IT1 587 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-201ENST00000334504 RPF1Q9H9Y2 349 aaKnown RBP10.35□□□□□ -0.75
COL4A6-201ENST00000334504 PRDM5Q9NQX1 630 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-201ENST00000334504 TMEM161AQ9NX61 479 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 ETAA1Q9NY74 926 aa10.35□□□□□ -0.75
COL4A6-201ENST00000334504 hCG_1984214I3L0E3 225 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 PAX7P23759 505 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 NLRP11P59045 1033 aaKnown RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 IFNEQ86WN2 208 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 ZNF713Q8N859 430 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 BTN2A2Q8WVV5 523 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 FAM162AQ96A26 154 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms