RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 PSMC6P62333 389 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 COL23A1Q86Y22 540 aaPredicted RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 MICALL2Q8IY33 904 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 AMNQ9BXJ7 453 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 TRABDQ9H4I3 376 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 KIAA1024Q9UPX6 916 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 SSU72P8A0A1W2PR75 194 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 FSBPO95073 299 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 CLPTM1O96005 669 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 XIAPP98170 497 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 STX5Q13190 355 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 KCNB1Q14721 858 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 ZNF827Q17R98 1081 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 CCDC142Q17RM4 750 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 LCORLQ8N3X6 602 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 CCNYQ8ND76 341 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 ZNF564Q8TBZ8 553 aaPredicted RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 PARVAQ9NVD7 372 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 SNX12Q9UMY4 172 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 VIRMAQ69YN4 1812 aaKnown RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 HNRNPH1P31943 449 aaKnown RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 RAP1GAPP47736 663 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 PEX5P50542 639 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 IFNL3Q8IZI9 196 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 CEP44Q9C0F1 390 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 DLGAP2Q9P1A6 1054 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 SPDYE16A6NNV3 312 aaPredicted RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 KATNA1O75449 491 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 ZMYND10O75800 440 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 CTSWP56202 376 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 SPDYE2Q495Y8 402 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 ZNF790Q6PG37 636 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 KRT74Q7RTS7 529 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 METTL23Q86XA0 190 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 CCNJLQ8IV13 435 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 FAM45AQ8TCE6 357 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 CALN1Q9BXU9 219 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 ALBP02768 609 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 FBXW10Q5XX13 1052 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 PNMA1Q8ND90 353 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 EMILIN3Q9NT22 766 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 CENPXA8MT69 81 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 NBPF26B4DH59 902 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 ATP6V1G2O95670 118 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 SNAP25P60880 206 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 MECOMQ03112 1051 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 C1DQ13901 141 aaKnown RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 CCDC36Q8IYA8 594 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 NBPF15Q8N660 670 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 SPATA4Q8NEY3 305 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 SPDYE1Q8NFV5 336 aaPredicted RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 B4GALNT2Q8NHY0 566 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 OMA1Q96E52 524 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 USP44Q9H0E7 712 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 SLC52A2Q9HAB3 445 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 AP3M1Q9Y2T2 418 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 LRRIQ1Q96JM4 1722 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 PREX2Q70Z35 1606 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 IMPDH2P12268 514 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 MAPK1P28482 360 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 FRMD5Q7Z6J6 570 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 RCOR2Q8IZ40 523 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 CLEC4FQ8N1N0 589 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 STAG2Q8N3U4 1231 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 DLG3Q92796 817 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 CCDC17Q96LX7 622 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 AP1M1Q9BXS5 423 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 ISCUQ9H1K1 167 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 MANSC1Q9H8J5 431 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 PLA2R1Q13018 1463 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 QRICH2Q9H0J4 1663 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 SF3B1O75533 1304 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 PDS5AQ29RF7 1337 aaKnown RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 EVPLLA8MZ36 301 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 SH2B2O14492 632 aaPredicted RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 DNALI1O14645 258 aaPredicted RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 TAGAPQ8N103 731 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 RAB42Q8N4Z0 105 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 PPHLN1Q8NEY8 458 aaKnown RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 NUP85Q9BW27 656 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 RXFP1Q9HBX9 757 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 KMT5AQ9NQR1 393 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 FAM32AQ9Y421 112 aaKnown RBP5.82□□□□□ -1.48
PTPRB-202ENST00000334414 MED14O60244 1454 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 TCP11X1B4DZS4 312 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 RTN2O75298 545 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 STAT5AP42229 794 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 STAT5BP51692 787 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 FCHO2Q0JRZ9 810 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 TRIP10Q15642 601 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 DGUOKQ16854 277 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 BBS9Q3SYG4 887 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 NOD1Q9Y239 953 aa5.82□□□□□ -1.48
PTPRB-202ENST00000334414 IGF2BP3O00425 579 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 CES2O00748 559 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 RHPN2Q8IUC4 686 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 RPAP3Q9H6T3 665 aaPredicted RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 A0A1B0GTH6 734 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 TTLL1O95922 423 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 FAM200BP0CF97 657 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms