RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 GMNNO75496 209 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 RSPH10BP0C881 870 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 GNAT1P11488 350 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 MARK3P27448 753 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 CASP7P55210 303 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 CAV1Q03135 178 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 PRKG1Q13976 671 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 RAPH1Q70E73 1250 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 ARHGEF28Q8N1W1 1705 aaKnown RBP14.93□□□□□ -0.02
EPHB3-201ENST00000330394 YARSP54577 528 aaKnown RBP14.93□□□□□ -0.02
EPHB3-201ENST00000330394 TMC3Q7Z5M5 1100 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 CPA5Q8WXQ8 436 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 TRIM56Q9BRZ2 755 aaKnown RBP14.93□□□□□ -0.02
EPHB3-201ENST00000330394 ZNF711Q9Y462 761 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 HEY1Q9Y5J3 304 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 PON1P27169 355 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 AP2B1P63010 937 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 MRPS35P82673 323 aaKnown RBP14.93□□□□□ -0.02
EPHB3-201ENST00000330394 RCN1Q15293 331 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 MCUQ8NE86 351 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 FAM213AQ9BRX8 229 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 TMEM117Q9H0C3 514 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 TMEM253P0C7T8 217 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 HOXA7P31268 230 aaPredicted RBP14.93□□□□□ -0.02
EPHB3-201ENST00000330394 ALDH5A1P51649 535 aaPredicted RBP14.93□□□□□ -0.02
EPHB3-201ENST00000330394 ALDH18A1P54886 795 aaKnown RBP14.93□□□□□ -0.02
EPHB3-201ENST00000330394 SWT1Q5T5J6 900 aaKnown RBP14.93□□□□□ -0.02
EPHB3-201ENST00000330394 ATG16L1Q676U5 607 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 FAF2Q96CS3 445 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 C15orf41Q9Y2V0 281 aa14.93□□□□□ -0.02
EPHB3-201ENST00000330394 SPATA31A3Q5VYP0 1347 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 B2RBV5 119 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 UBAP1LF5GYI3 381 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 EDRF1Q3B7T1 1238 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 MTERF2Q49AM1 385 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 CCNYQ8ND76 341 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 NGRNQ9NPE2 291 aaKnown RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 PFDN4Q9NQP4 134 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 ZFATQ9P243 1243 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 PPLO60437 1756 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 PFASO15067 1338 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 FOXN3O00409 490 aaPredicted RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 IPO5O00410 1097 aaKnown RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 ITIH2P19823 946 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 PSMA2P25787 234 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 COILP38432 576 aaPredicted RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 ELF3P78545 371 aaPredicted RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 PREPLQ4J6C6 727 aaPredicted RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 PPP6R3Q5H9R7 873 aaPredicted RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 LVRNQ6Q4G3 990 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 ZBTB33Q86T24 672 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 AGAP11Q8TF27 550 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 TMEM237Q96Q45 408 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 APOBEC2Q9Y235 224 aaKnown RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 INPP5FQ9Y2H2 1132 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 CLTCQ00610 1675 aaKnown RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 CAPN9O14815 690 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 RTN2O75298 545 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 GH2P01242 217 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 HNRNPCP07910 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 ATXN3P54252 364 aaPredicted RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 DEUP1Q05D60 604 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 ITGB3BPQ13352 177 aaPredicted RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 NUDCD3Q8IVD9 361 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 MAP7D3Q8IWC1 876 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 PDZD8Q8NEN9 1154 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 SYN2Q92777 582 aaPredicted RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 SHCBP1LQ9BZQ2 653 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 CDC42EP4Q9H3Q1 356 aaKnown RBP14.92□□□□□ -0.02
EPHB3-201ENST00000330394 NEU2Q9Y3R4 380 aa14.92□□□□□ -0.02
EPHB3-201ENST00000330394 CCDC22O60826 627 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 RASA1P20936 1047 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 CNGA1P29973 690 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 STAT2P52630 851 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 ERICH1Q86X53 443 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 TRIM50Q86XT4 487 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 COL23A1Q86Y22 540 aaPredicted RBP14.91□□□□□ -0.02
EPHB3-201ENST00000330394 CXorf38Q8TB03 319 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 ZNF507Q8TCN5 953 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 ACTRT1Q8TDG2 376 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 CCT6BQ92526 530 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 FAM20AQ96MK3 541 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 NUDT12Q9BQG2 462 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 GDF3Q9NR23 364 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 KLRK1P26718 216 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 MAGEA4P43358 317 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 KCNJ2P63252 427 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 DYNC1I2Q13409 638 aaKnown RBP14.91□□□□□ -0.02
EPHB3-201ENST00000330394 RHOT1Q8IXI2 618 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 TTC25Q96NG3 672 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
EPHB3-201ENST00000330394 PAPOLBQ9NRJ5 636 aaKnown RBP14.91□□□□□ -0.02
EPHB3-201ENST00000330394 AGPSO00116 658 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 KCNQ2O43526 872 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 ZBED4O75132 1171 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 ZBED1O96006 694 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 ECE1P42892 770 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 ART3Q13508 389 aa14.91□□□□□ -0.02
EPHB3-201ENST00000330394 THOC5Q13769 683 aaKnown RBP14.91□□□□□ -0.02
EPHB3-201ENST00000330394 QPCTQ16769 361 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms