RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 GZMAP12544 262 aa23.1■■□□□ 1.29
LIMS2-201ENST00000324938 ECHS1P30084 290 aa23.1■■□□□ 1.29
LIMS2-201ENST00000324938 USP8P40818 1118 aa23.1■■□□□ 1.29
LIMS2-201ENST00000324938 GARTP22102 1010 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 GUCY2FP51841 1108 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 GPC5P78333 572 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 BRDTQ58F21 947 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-201ENST00000324938 CFAP58Q5T655 872 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 MIS18BP1Q6P0N0 1132 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 GPD1LQ8N335 351 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 FBXL13Q8NEE6 735 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 HELQQ8TDG4 1101 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 PCDHB18PQ96TA0 734 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 HOXC10Q9NYD6 342 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 GGA3Q9NZ52 723 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 ARHGAP28Q9P2N2 729 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 AFG3L2Q9Y4W6 797 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 H0YCG3 227 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 HNRNPDLO14979 420 aaKnown RBP23.09■■□□□ 1.29
LIMS2-201ENST00000324938 FGGP02679 453 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 ABCD1P33897 745 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 HSPA9P38646 679 aaKnown RBP23.09■■□□□ 1.29
LIMS2-201ENST00000324938 RNPC3Q96LT9 517 aaKnown RBP23.09■■□□□ 1.29
LIMS2-201ENST00000324938 NT5C1BQ96P26 610 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 POP1Q99575 1024 aaKnown RBP23.09■■□□□ 1.29
LIMS2-201ENST00000324938 TOPORSQ9NS56 1045 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-201ENST00000324938 CTTNBP2NLQ9P2B4 639 aa23.09■■□□□ 1.29
LIMS2-201ENST00000324938 CYP26A1O43174 497 aa23.08■■□□□ 1.29
LIMS2-201ENST00000324938 MTA2O94776 668 aa23.08■■□□□ 1.29
LIMS2-201ENST00000324938 SUPT20HL2P0C7V6 817 aa23.08■■□□□ 1.29
LIMS2-201ENST00000324938 SP4Q02446 784 aa23.08■■□□□ 1.29
LIMS2-201ENST00000324938 SUPT20HL1Q3ZLR7 823 aa23.08■■□□□ 1.29
LIMS2-201ENST00000324938 TAS1R3Q7RTX0 852 aa23.08■■□□□ 1.29
LIMS2-201ENST00000324938 CCDC26Q8TAB7 109 aa23.08■■□□□ 1.29
LIMS2-201ENST00000324938 IFT74Q96LB3 600 aa23.08■■□□□ 1.29
LIMS2-201ENST00000324938 POLR3FQ9H1D9 316 aaPredicted RBP23.08■■□□□ 1.29
LIMS2-201ENST00000324938 RAB20Q9NX57 234 aa23.08■■□□□ 1.29
LIMS2-201ENST00000324938 CLUL1Q15846 466 aa23.08■■□□□ 1.28
LIMS2-201ENST00000324938 XKR3Q5GH77 459 aa23.08■■□□□ 1.28
LIMS2-201ENST00000324938 MAATS1Q7Z4T9 603 aa23.08■■□□□ 1.28
LIMS2-201ENST00000324938 SLC47A2Q86VL8 602 aa23.08■■□□□ 1.28
LIMS2-201ENST00000324938 TAS1R2Q8TE23 839 aa23.08■■□□□ 1.28
LIMS2-201ENST00000324938 NAP1L3Q99457 506 aaPredicted RBP23.08■■□□□ 1.28
LIMS2-201ENST00000324938 GPRC5DQ9NZD1 345 aa23.08■■□□□ 1.28
LIMS2-201ENST00000324938 AMACRQ9UHK6 382 aa23.08■■□□□ 1.28
LIMS2-201ENST00000324938 ALG6Q9Y672 507 aa23.08■■□□□ 1.28
LIMS2-201ENST00000324938 PAPPA2Q9BXP8 1791 aa23.08■■□□□ 1.28
LIMS2-201ENST00000324938 FAM170AA1A519 330 aa23.07■■□□□ 1.28
LIMS2-201ENST00000324938 MIF4GDA9UHW6 222 aaKnown RBP23.07■■□□□ 1.28
LIMS2-201ENST00000324938 SHOX2O60902 331 aaPredicted RBP23.07■■□□□ 1.28
LIMS2-201ENST00000324938 FMO1Q01740 532 aa23.07■■□□□ 1.28
LIMS2-201ENST00000324938 PRPF4BQ13523 1007 aaKnown RBP23.07■■□□□ 1.28
LIMS2-201ENST00000324938 HLTFQ14527 1009 aaKnown RBP eCLIP23.07■■□□□ 1.28
LIMS2-201ENST00000324938 TTMPQ5BVD1 217 aa23.07■■□□□ 1.28
LIMS2-201ENST00000324938 SH3D19Q5HYK7 790 aa23.07■■□□□ 1.28
LIMS2-201ENST00000324938 CD302Q8IX05 232 aa23.07■■□□□ 1.28
LIMS2-201ENST00000324938 PIK3R5Q8WYR1 880 aa23.07■■□□□ 1.28
LIMS2-201ENST00000324938 SEC14L1Q92503 715 aa23.07■■□□□ 1.28
LIMS2-201ENST00000324938 PKNOX2Q96KN3 472 aa23.07■■□□□ 1.28
LIMS2-201ENST00000324938 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.07■■□□□ 1.28
LIMS2-201ENST00000324938 ICAM3P32942 547 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 POU5F1Q01860 360 aaKnown RBP23.06■■□□□ 1.28
LIMS2-201ENST00000324938 PPP2R5EQ16537 467 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 SV2AQ7L0J3 742 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 ALG3Q92685 438 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 OTOFQ9HC10 1997 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 CYP11B1P15538 503 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 PTENP60484 403 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 DNERQ8NFT8 737 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.06■■□□□ 1.28
LIMS2-201ENST00000324938 KCNN1Q92952 543 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 ARL8AQ96BM9 186 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 BICD1Q96G01 975 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 KCNG1Q9UIX4 513 aa23.06■■□□□ 1.28
LIMS2-201ENST00000324938 MMEP08473 750 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 PDE6CP51160 858 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 EMC2Q15006 297 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 MTERF2Q49AM1 385 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 CHST13Q8NET6 341 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 RPS6KC1Q96S38 1066 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 ACP6Q9NPH0 428 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 SYNGAP1Q96PV0 1343 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 ZNF233A6NK53 670 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 TTI1O43156 1089 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 ATG7O95352 703 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 IVLP07476 585 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 CDR2Q01850 454 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 SP2Q02086 613 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 STXBP2Q15833 593 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 MORC4Q8TE76 937 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 SGIP1Q9BQI5 828 aa23.05■■□□□ 1.28
LIMS2-201ENST00000324938 CWC15Q9P013 229 aaKnown RBP23.05■■□□□ 1.28
LIMS2-201ENST00000324938 SORBS3O60504 671 aa23.04■■□□□ 1.28
LIMS2-201ENST00000324938 ZC3H11AO75152 810 aaKnown RBP eCLIP23.04■■□□□ 1.28
LIMS2-201ENST00000324938 DLATP10515 647 aaKnown RBP23.04■■□□□ 1.28
LIMS2-201ENST00000324938 C15orf39Q6ZRI6 1047 aa23.04■■□□□ 1.28
LIMS2-201ENST00000324938 DDX42Q86XP3 938 aaKnown RBP eCLIP23.04■■□□□ 1.28
LIMS2-201ENST00000324938 UBL4BQ8N7F7 174 aa23.04■■□□□ 1.28
LIMS2-201ENST00000324938 FAM213AQ9BRX8 229 aa23.04■■□□□ 1.28
LIMS2-201ENST00000324938 NR2E1Q9Y466 385 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms