RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	CCDC6	Q16204	474 aa		12.65	□□□□□ -0.38
DDR1-223	ENST00000324771	C2orf69	Q8N8R5	385 aa		12.65	□□□□□ -0.38
DDR1-223	ENST00000324771	TMEM35B	Q8NCS4	154 aa		12.65	□□□□□ -0.38
DDR1-223	ENST00000324771	GDAP1	Q8TB36	358 aa		12.65	□□□□□ -0.38
DDR1-223	ENST00000324771	HDAC7	Q8WUI4	952 aa		12.65	□□□□□ -0.38
DDR1-223	ENST00000324771	MAIP1	Q8WWC4	291 aa		12.65	□□□□□ -0.38
DDR1-223	ENST00000324771	NACA2	Q9H009	215 aa		12.65	□□□□□ -0.38
DDR1-223	ENST00000324771	PNMA3	Q9UL41	463 aa		12.65	□□□□□ -0.38
DDR1-223	ENST00000324771	MYH2	Q9UKX2	1941 aa		12.65	□□□□□ -0.39
DDR1-223	ENST00000324771	VWA5A	O00534	786 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	EGFR	P00533	1210 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	CTSH	P09668	335 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	GPC3	P51654	580 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	NCOA4	Q13772	614 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	LY6K	Q17RY6	165 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	TMEM119	Q4V9L6	283 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	VSIG1	Q86XK7	387 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	RBM46	Q8TBY0	533 aa	Known RBP	12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	ZBTB45	Q96K62	511 aa	Predicted RBP	12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	PXMP2	Q9NR77	195 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	INTS9	Q9NV88	658 aa	Known RBP	12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	RAD51C	O43502	376 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	ATP8B1	O43520	1251 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	VIL1	P09327	827 aa	Known RBP	12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	NR1D1	P20393	614 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	DUOXA2	Q1HG44	320 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	TAOK1	Q7L7X3	1001 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	FAM83A	Q86UY5	434 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	TMEM117	Q9H0C3	514 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	HSD3B7	Q9H2F3	369 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	SNX25	Q9H3E2	840 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	FBXL5	Q9UKA1	691 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	COMT	P21964	271 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	PSMC1	P62191	440 aa	Known RBP	12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	PGM5	Q15124	567 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	TMED2	Q15363	201 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	PPP2R5E	Q16537	467 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	EMB	Q6PCB8	327 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	CCDC137	Q6PK04	289 aa	Known RBP	12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	MKL1	Q969V6	931 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	TSNARE1	Q96NA8	513 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771		Q4G0T1	1027 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	GLRA4	Q5JXX5	417 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	SLC35C1	Q96A29	364 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	P2RX7	Q99572	595 aa	Known RBP	12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	AGO4	Q9HCK5	861 aa	Known RBP	12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	CYP26B1	Q9NR63	512 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	AGAP1	Q9UPQ3	857 aa		12.64	□□□□□ -0.39
DDR1-223	ENST00000324771	LOC102724159	A0A0B4J2E5	919 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771		M0QYV0	167 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	RGL2	O15211	777 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	MAP3K6	O95382	1288 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	FDX1	P10109	184 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	SLC12A3	P55017	1021 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	PWP2	Q15269	919 aa	Known RBP	12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	DARS2	Q6PI48	645 aa	Known RBP	12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	WDR59	Q6PJI9	974 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	PRPF31	Q8WWY3	499 aa	Known RBP	12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	TATDN2	Q93075	761 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	KIF12	Q96FN5	646 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	LRRC10B	A6NIK2	292 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	SLC16A3	O15427	465 aa	Known RBP	12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	MME	P08473	750 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	CYP2C8	P10632	490 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	RARB	P10826	455 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	DLG4	P78352	724 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	JAG1	P78504	1218 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	SEMA3F	Q13275	785 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	CBWD6	Q4V339	395 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	CBWD3	Q5JTY5	395 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	CBWD5	Q5RIA9	395 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	EFCAB12	Q6NXP0	572 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	B4GALNT4	Q76KP1	1039 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	TRPM4	Q8TD43	1214 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	TCP11	Q8WWU5	503 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	A1CF	Q9NQ94	594 aa	Known RBP	12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	MYO9B	Q13459	2157 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	BCL9L	Q86UU0	1499 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	CCDC188	H7C350	402 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	PDGFRB	P09619	1106 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	RPS12	P25398	132 aa	Known RBP	12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	PHKA2	P46019	1235 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	IRX4	P78413	519 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	GJC2	Q5T442	439 aa	Predicted RBP	12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	GRK7	Q8WTQ7	553 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	STK38L	Q9Y2H1	464 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	RIPK3	Q9Y572	518 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	CAPN7	Q9Y6W3	813 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	UBE4B	O95155	1302 aa		12.63	□□□□□ -0.39
DDR1-223	ENST00000324771	CCL15-CCL14	A0A0B4J2E2	113 aa		12.62	□□□□□ -0.39
DDR1-223	ENST00000324771		A6NJR5	290 aa		12.62	□□□□□ -0.39
DDR1-223	ENST00000324771	RASGRF2	O14827	1237 aa		12.62	□□□□□ -0.39
DDR1-223	ENST00000324771	SPATA31C1	P0DKV0	1188 aa		12.62	□□□□□ -0.39
DDR1-223	ENST00000324771	FGFR4	P22455	802 aa		12.62	□□□□□ -0.39
DDR1-223	ENST00000324771	ADORA2B	P29275	332 aa		12.62	□□□□□ -0.39
DDR1-223	ENST00000324771	CCL15	Q16663	113 aa		12.62	□□□□□ -0.39
DDR1-223	ENST00000324771	ZC3H18	Q86VM9	953 aa	Known RBP	12.62	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms