RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 ARHGEF16Q5VV41 709 aa7.59□□□□□ -1.2
CSTF3-201ENST00000323959 LILRA6Q6PI73 481 aa7.59□□□□□ -1.2
CSTF3-201ENST00000323959 SPACA3Q8IXA5 215 aa7.59□□□□□ -1.2
CSTF3-201ENST00000323959 LCORLQ8N3X6 602 aa7.59□□□□□ -1.2
CSTF3-201ENST00000323959 SPATA20Q8TB22 786 aa7.59□□□□□ -1.2
CSTF3-201ENST00000323959 RMDN3Q96TC7 470 aa7.59□□□□□ -1.2
CSTF3-201ENST00000323959 C2orf42Q9NWW7 574 aa7.59□□□□□ -1.2
CSTF3-201ENST00000323959 MBD1Q9UIS9 605 aaPredicted RBP7.59□□□□□ -1.2
CSTF3-201ENST00000323959 MYBPHLA2RUH7 354 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 GAS2O43903 313 aaKnown RBP7.58□□□□□ -1.2
CSTF3-201ENST00000323959 EXTL3O43909 919 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 MICAL2O94851 1124 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 NR3C2P08235 984 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 SYPP08247 313 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 SFTPCP11686 197 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 GFPT1Q06210 699 aaPredicted RBP7.58□□□□□ -1.2
CSTF3-201ENST00000323959 USP39Q53GS9 565 aaKnown RBP7.58□□□□□ -1.2
CSTF3-201ENST00000323959 MARCH8Q5T0T0 291 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 C6orf132Q5T0Z8 1188 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 FAM200AQ8TCP9 573 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 BCL7CQ8WUZ0 217 aaPredicted RBP7.58□□□□□ -1.2
CSTF3-201ENST00000323959 FGF11Q92914 225 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 E2F7Q96AV8 911 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 EVI5LQ96CN4 794 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 TAAR1Q96RJ0 339 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 CLSTN3Q9BQT9 956 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 NRSN2Q9GZP1 204 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 RBM12Q9NTZ6 932 aaKnown RBP7.58□□□□□ -1.2
CSTF3-201ENST00000323959 ST3GAL5Q9UNP4 418 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 NOC2LQ9Y3T9 749 aaKnown RBP7.58□□□□□ -1.2
CSTF3-201ENST00000323959 SH3BP5O60239 455 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 CBFA2T3O75081 653 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 PDE6AP16499 860 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 CHMLP26374 656 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 TNNI3KQ59H18 835 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 TMPRSS12Q86WS5 348 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 PNPLA1Q8N8W4 532 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 FPGT-TNNI3KV9GXZ4 949 aa7.58□□□□□ -1.2
CSTF3-201ENST00000323959 NT5C1B-RDH14C9J2C7 533 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 ZNF263O14978 683 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 SERPINF2P08697 491 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 FCARP24071 287 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 GRNP28799 593 aaKnown RBP7.57□□□□□ -1.2
CSTF3-201ENST00000323959 GLUD2P49448 558 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 BECN1Q14457 450 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 CCDC96Q2M329 555 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 LMBRD2Q68DH5 695 aaPredicted RBP7.57□□□□□ -1.2
CSTF3-201ENST00000323959 ZNF598Q86UK7 904 aaKnown RBP7.57□□□□□ -1.2
CSTF3-201ENST00000323959 ZC3H18Q86VM9 953 aaKnown RBP7.57□□□□□ -1.2
CSTF3-201ENST00000323959 TMEM173Q86WV6 379 aaPredicted RBP7.57□□□□□ -1.2
CSTF3-201ENST00000323959 MINDY1Q8N5J2 469 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 NEDD1Q8NHV4 660 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 ITFG1Q8TB96 612 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 OTUD7AQ8TE49 926 aaPredicted RBP7.57□□□□□ -1.2
CSTF3-201ENST00000323959 ESYT1Q9BSJ8 1104 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 FZD8Q9H461 694 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 ZFP14Q9HCL3 533 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 PXMP2Q9NR77 195 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 VWA8A3KMH1 1905 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 SMARCA5O60264 1052 aaPredicted RBP7.57□□□□□ -1.2
CSTF3-201ENST00000323959 GJB3O75712 270 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 GBP1P32455 592 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 NFATC3Q12968 1075 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 C6orf118Q5T5N4 469 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 TANGO2Q6ICL3 276 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 SAMD3Q8N6K7 520 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 ST13P5Q8NFI4 369 aaPredicted RBP7.57□□□□□ -1.2
CSTF3-201ENST00000323959 BAHD1Q8TBE0 780 aaPredicted RBP7.57□□□□□ -1.2
CSTF3-201ENST00000323959 FAM49AQ9H0Q0 323 aaPredicted RBP7.57□□□□□ -1.2
CSTF3-201ENST00000323959 CAPN10Q9HC96 672 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 FBXW11Q9UKB1 542 aa7.57□□□□□ -1.2
CSTF3-201ENST00000323959 CYP2D7A0A087X1C5 515 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 HSPD1P10809 573 aaKnown RBP7.56□□□□□ -1.2
CSTF3-201ENST00000323959 PSMC3P17980 439 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 GDI1P31150 447 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 AFMP43652 599 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 DHPSP49366 369 aaPredicted RBP7.56□□□□□ -1.2
CSTF3-201ENST00000323959 KCNH2Q12809 1159 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 WDR44Q5JSH3 913 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 KCTD1Q719H9 257 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 LPCAT2Q7L5N7 544 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 TRPV4Q9HBA0 871 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 ERAP1Q9NZ08 941 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 PLXND1Q9Y4D7 1925 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 NOTCH2Q04721 2471 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 ARNTLO00327 626 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 ZC3H11AO75152 810 aaKnown RBP eCLIP7.56□□□□□ -1.22e-6■■□□□ 12.2
CSTF3-201ENST00000323959 CDK4P11802 303 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 MCCP23508 829 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 DSG1Q02413 1049 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 GHRHRQ02643 423 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 VAC14Q08AM6 782 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 RABEP1Q15276 862 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 TSGA10IPQ3SY00 556 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 CTR9Q6PD62 1173 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 ZNF444Q8N0Y2 327 aaPredicted RBP7.56□□□□□ -1.2
CSTF3-201ENST00000323959 HELQQ8TDG4 1101 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 EAF2Q96CJ1 260 aaPredicted RBP7.56□□□□□ -1.2
CSTF3-201ENST00000323959 SEMA3CQ99985 751 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 NRDE2Q9H7Z3 1164 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms