RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PPP2R5CQ13362 524 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 SLFN13Q68D06 897 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 TTBK2Q6IQ55 1244 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 ADGRA3Q8IWK6 1321 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 VWA5AO00534 786 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 SSTP61278 116 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 STX5Q13190 355 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 SEC24BO95487 1268 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 GNAT1P11488 350 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 HSPA2P54652 639 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 LRRC4Q9HBW1 653 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 MRPL39Q9NYK5 338 aaKnown RBP10.27□□□□□ -0.77
COL12A1-201ENST00000322507 FAM170AA1A519 330 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 MEIS1O00470 390 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 POTEIP0CG38 1075 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 SCRN1Q12765 414 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 HIF1AQ16665 826 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 ZFRQ96KR1 1074 aaKnown RBP10.26□□□□□ -0.77
COL12A1-201ENST00000322507 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 ZNF285Q96NJ3 590 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 RCOR1Q9UKL0 485 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 TRADDQ15628 312 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 ENKURQ8TC29 256 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 DCPSQ96C86 337 aaKnown RBP10.26□□□□□ -0.77
COL12A1-201ENST00000322507 MAGEA13PA6NCF6 341 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 ARL4CP56559 192 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 MECOMQ03112 1051 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 ACAD11Q709F0 780 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 MCM8Q9UJA3 840 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 ZFP69BQ9UJL9 534 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 FDX1P10109 184 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 CPA1P15085 419 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 PHKA1P46020 1223 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 GPR141Q7Z602 305 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 DESI2Q9BSY9 194 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 FAM167BQ9BTA0 163 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 INO80BQ9C086 356 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-201ENST00000322507 MCUBQ9NWR8 336 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 RABL2BQ9UNT1 228 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 SH3GLB1Q9Y371 365 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 AHCYL1O43865 530 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 IL10P22301 178 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 MAPRE2Q15555 327 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.26□□□□□ -0.77
COL12A1-201ENST00000322507 CASP2P42575 452 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 AP3M2P53677 418 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 DSG1Q02413 1049 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 MAEAQ7L5Y9 396 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 EPB41L5Q9HCM4 733 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 KMT5AQ9NQR1 393 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 IARS2Q9NSE4 1012 aaKnown RBP10.26□□□□□ -0.77
COL12A1-201ENST00000322507 NDUFA10O95299 355 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 CUL4AQ13619 759 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 C16orf72Q14CZ0 275 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 CIDEBQ9UHD4 219 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 SEPT9Q9UHD8 586 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-201ENST00000322507 SGSM1Q2NKQ1 1148 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 PYROXD1Q8WU10 500 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 CNPY3Q9BT09 278 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 PDZK1P1A8MUH7 402 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 BUB1O43683 1085 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 HMOX2P30519 316 aa10.26□□□□□ -0.77
COL12A1-201ENST00000322507 TRIP4Q15650 581 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-201ENST00000322507 KIF20BQ96Q89 1820 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 A0A0D9SFI3 127 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 CCNE1P24864 410 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 SLC39A2Q9NP94 309 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 ABCB1P08183 1280 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-201ENST00000322507 S100A12P80511 92 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 NHEJ1Q9H9Q4 299 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-201ENST00000322507 SPATA2Q9UM82 520 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 SEMA3DO95025 777 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 YWHABP31946 246 aaKnown RBP10.25□□□□□ -0.77
COL12A1-201ENST00000322507 RNF139Q8WU17 664 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 AP5M1Q9H0R1 490 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 PNMA8CA0A1B0GUJ8 204 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 MORF4L2Q15014 288 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 CLHC1Q8NHS4 586 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 PBXIP1Q96AQ6 731 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 KCNJ6P48051 423 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 SERPINH1P50454 418 aaKnown RBP10.25□□□□□ -0.77
COL12A1-201ENST00000322507 LONRF3Q496Y0 759 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 ABRAXAS1Q6UWZ7 409 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 SYDE1Q6ZW31 735 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-201ENST00000322507 DCAF4Q8WV16 495 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 TP53INP1Q96A56 240 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 PI4KBQ9UBF8 816 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 PTPN22Q9Y2R2 807 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 KIAA0391O15091 583 aaKnown RBP10.25□□□□□ -0.77
COL12A1-201ENST00000322507 TXNDC11Q6PKC3 985 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 RGS9BPQ6ZS82 235 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 DEPDC1BQ8WUY9 529 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 GJA10Q969M2 543 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 TOPORSQ9NS56 1045 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-201ENST00000322507 INPP5AQ14642 412 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 TOGARAM2Q6ZUX3 1019 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 G2E3Q7L622 706 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 DNAJC9Q8WXX5 260 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 DGCR14Q96DF8 476 aaKnown RBP10.25□□□□□ -0.77
COL12A1-201ENST00000322507 EPAS1Q99814 870 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms