RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 NFIBO00712 420 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 CALCAP01258 141 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 ADCY2Q08462 1091 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 KIAA1755Q5JYT7 1200 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 CENPPQ6IPU0 288 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 PRMT1Q99873 361 aaKnown RBP17.57■□□□□ 0.4
CLIP4-201ENST00000320081 STK33Q9BYT3 514 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 VCPKMTQ9H867 229 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 FOXP2O15409 715 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 CFLARO15519 480 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 PON1P27169 355 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 JAK3P52333 1124 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 RC3H1Q5TC82 1133 aaKnown RBP17.56■□□□□ 0.4
CLIP4-201ENST00000320081 DEFB132Q7Z7B7 95 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 CCT6BQ92526 530 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 HVCN1Q96D96 273 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 RPS6KC1Q96S38 1066 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 FAM167BQ9BTA0 163 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 UBE4BO95155 1302 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 M0QYV0 167 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 SARNPP82979 210 aaKnown RBP17.56■□□□□ 0.4
CLIP4-201ENST00000320081 LMNB2Q03252 620 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 SLC29A2Q14542 456 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 IL17AQ16552 155 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 FAM102AQ5T9C2 384 aaPredicted RBP17.56■□□□□ 0.4
CLIP4-201ENST00000320081 CENPUQ71F23 418 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 ZNF571Q7Z3V5 609 aaPredicted RBP17.56■□□□□ 0.4
CLIP4-201ENST00000320081 TRIM11Q96F44 468 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 PNMA5Q96PV4 448 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 DNAJC7Q99615 494 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 AGPAT3Q9NRZ7 376 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 SLC9A2Q9UBY0 812 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 EIF3BP55884 814 aaKnown RBP17.56■□□□□ 0.4
CLIP4-201ENST00000320081 VPS72Q15906 364 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 SLC20A1Q8WUM9 679 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 MTRQ99707 1265 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 SNX25Q9H3E2 840 aa17.56■□□□□ 0.4
CLIP4-201ENST00000320081 JPH1Q9HDC5 661 aaPredicted RBP17.56■□□□□ 0.4
CLIP4-201ENST00000320081 HERC5Q9UII4 1024 aaKnown RBP17.56■□□□□ 0.4
CLIP4-201ENST00000320081 RCCD1A6NED2 376 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 TCP11X1B4DZS4 312 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 GSTA1P08263 222 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 GSTA2P09210 222 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 NCF2P19878 526 aaPredicted RBP17.55■□□□□ 0.4
CLIP4-201ENST00000320081 ARSEP51690 589 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 EPM2AIP1Q7L775 607 aaPredicted RBP17.55■□□□□ 0.4
CLIP4-201ENST00000320081 KDELC2Q7Z4H8 507 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 USP38Q8NB14 1042 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 LSP1P33241 339 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 MYLK4Q86YV6 388 aaPredicted RBP17.55■□□□□ 0.4
CLIP4-201ENST00000320081 KIF2BQ8N4N8 673 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 CASKIN2Q8WXE0 1202 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 SEL1LQ9UBV2 794 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.55■□□□□ 0.4
CLIP4-201ENST00000320081 ITSN1Q15811 1721 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 CNTRLQ7Z7A1 2325 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 PDE2AO00408 941 aaPredicted RBP17.55■□□□□ 0.4
CLIP4-201ENST00000320081 GIPC1O14908 333 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 MDM2Q00987 491 aaPredicted RBP17.55■□□□□ 0.4
CLIP4-201ENST00000320081 RYBPQ8N488 228 aaPredicted RBP17.55■□□□□ 0.4
CLIP4-201ENST00000320081 DDX23Q9BUQ8 820 aaKnown RBP17.55■□□□□ 0.4
CLIP4-201ENST00000320081 CNOT7Q9UIV1 285 aaKnown RBP17.55■□□□□ 0.4
CLIP4-201ENST00000320081 CREB3O43889 395 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 OPHN1O60890 802 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 JAMLQ86YT9 394 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 BLOC1S4Q9NUP1 217 aa17.55■□□□□ 0.4
CLIP4-201ENST00000320081 FAM86B1E9PN63 330 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 TJP3O95049 919 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 GGPS1O95749 300 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 FAM86B2P0C5J1 330 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 TMPRSS15P98073 1019 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 FOXD4Q12950 439 aaPredicted RBP17.54■□□□□ 0.4
CLIP4-201ENST00000320081 RPS6KA2Q15349 733 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 C18orf8Q96DM3 657 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 UNC45AQ9H3U1 944 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 CNOT10Q9H9A5 744 aaKnown RBP17.54■□□□□ 0.4
CLIP4-201ENST00000320081 IFT122Q9HBG6 1241 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 ETNK1Q9HBU6 452 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 PPARGC1AQ9UBK2 798 aaKnown RBP17.54■□□□□ 0.4
CLIP4-201ENST00000320081 MARCOQ9UEW3 520 aaPredicted RBP17.54■□□□□ 0.4
CLIP4-201ENST00000320081 TPX2Q9ULW0 747 aaKnown RBP17.54■□□□□ 0.4
CLIP4-201ENST00000320081 JCADQ9P266 1359 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 CASP5P51878 434 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 MYO1EQ12965 1108 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 GIT2Q14161 759 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 COL23A1Q86Y22 540 aaPredicted RBP17.54■□□□□ 0.4
CLIP4-201ENST00000320081 GPD1LQ8N335 351 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 N4BP2L2Q92802 583 aaPredicted RBP17.54■□□□□ 0.4
CLIP4-201ENST00000320081 TGS1Q96RS0 853 aaKnown RBP17.54■□□□□ 0.4
CLIP4-201ENST00000320081 SHPRHQ149N8 1683 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 CHN1P15882 459 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 ADORA2BP29275 332 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 ARL4AP40617 200 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 MDH1P40925 334 aaKnown RBP17.54■□□□□ 0.4
CLIP4-201ENST00000320081 SEPT6Q14141 434 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 EDRF1Q3B7T1 1238 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 MDH1BQ5I0G3 518 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 HHIPL2Q6UWX4 724 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 ARHGAP24Q8N264 748 aa17.54■□□□□ 0.4
CLIP4-201ENST00000320081 EXT2Q93063 718 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms