RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 HOXA7P31268 230 aaPredicted RBP18.51■□□□□ 0.55
SCAMP4-201ENST00000316097 CNTN2Q02246 1040 aa18.51■□□□□ 0.55
SCAMP4-201ENST00000316097 SP4Q02446 784 aa18.51■□□□□ 0.55
SCAMP4-201ENST00000316097 GHRHRQ02643 423 aa18.51■□□□□ 0.55
SCAMP4-201ENST00000316097 KCNA1Q09470 495 aa18.51■□□□□ 0.55
SCAMP4-201ENST00000316097 SH3D19Q5HYK7 790 aa18.51■□□□□ 0.55
SCAMP4-201ENST00000316097 MIER3Q7Z3K6 550 aa18.51■□□□□ 0.55
SCAMP4-201ENST00000316097 ANKS4BQ8N8V4 417 aa18.51■□□□□ 0.55
SCAMP4-201ENST00000316097 TCP11Q8WWU5 503 aa18.51■□□□□ 0.55
SCAMP4-201ENST00000316097 CYP39A1Q9NYL5 469 aa18.51■□□□□ 0.55
SCAMP4-201ENST00000316097 UCHL3P15374 230 aa18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 NAA25Q14CX7 972 aa18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 MAP1SQ66K74 1059 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 USP50Q70EL3 339 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 KSR1Q8IVT5 923 aa18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 CCDC63Q8NA47 563 aa18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 SEC14L1Q92503 715 aa18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 L3MBTL3Q96JM7 780 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 SMIM23A6NLE4 172 aa18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 EIF3BP55884 814 aaKnown RBP18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 HOOK3Q86VS8 718 aa18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 RBM46Q8TBY0 533 aaKnown RBP18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 ATP8B4Q8TF62 1192 aa18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 ZNF317Q96PQ6 595 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 NR2E1Q9Y466 385 aa18.5■□□□□ 0.55
SCAMP4-201ENST00000316097 TLDC2A0PJX2 215 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 BUB1BO60566 1050 aaPredicted RBP18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 PPFIA2O75334 1257 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 RGS20O76081 388 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 FGGP02679 453 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 CLTAP09496 248 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 EPHA7Q15375 998 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 CENPTQ96BT3 561 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 RIT2Q99578 217 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 KCTD10Q9H3F6 313 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 SUCLA2Q9P2R7 463 aaPredicted RBP18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 STXBP5LQ9Y2K9 1186 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 H2AFZP0C0S5 128 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 FDX1P10109 184 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 H2AFVQ71UI9 128 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 ADAT2Q7Z6V5 191 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 NT5DC3Q86UY8 548 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 PNMA8AQ86V59 439 aaPredicted RBP18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 LMBR1Q8WVP7 490 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 FAXDC2Q96IV6 333 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 ACAD9Q9H845 621 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 TUFT1Q9NNX1 390 aa18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 BZW2Q9Y6E2 419 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-201ENST00000316097 CETN3O15182 167 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 NEBLO76041 1014 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 CCNE2O96020 404 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 NR2F2P24468 414 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 MKRN3Q13064 507 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 PRPF4BQ13523 1007 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 UGCGQ16739 394 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 SLFN11Q7Z7L1 901 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 VSIG10LQ86VR7 867 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 DHX37Q8IY37 1157 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 ANKRD13AQ8IZ07 590 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 STAMBPL1Q96FJ0 436 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 PARP14Q460N5 1801 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 BCRP11274 1271 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 HOXD13P35453 343 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 COPB2P35606 906 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 FAM133BQ5BKY9 247 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 C1orf186Q6ZWK4 172 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 TBC1D1Q86TI0 1168 aaPredicted RBP18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 LRRC34Q8IZ02 419 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 OPTNQ96CV9 577 aa18.48■□□□□ 0.55
SCAMP4-201ENST00000316097 CCDC189A1A4V9 331 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 NMT1P30419 496 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 POU5F1Q01860 360 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 MYO1EQ12965 1108 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 EXOC3L4Q17RC7 722 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 ZC2HC1CQ53FD0 456 aaPredicted RBP18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 SYCE1Q8N0S2 351 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 ATXN2LQ8WWM7 1075 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 ELAC2Q9BQ52 826 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 TXLNGYQ9BZA5 131 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 RAB17Q9H0T7 212 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 SLC12A4Q9UP95 1085 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 ASTN1O14525 1302 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 OAZ1P54368 228 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 PPP2R5AQ15172 486 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 DPY19L2P1Q6NXN4 242 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 ERO1BQ86YB8 467 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 ANKRD35Q8N283 1001 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 MYCT1Q8N699 235 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 U2AF1L4Q8WU68 220 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 RSRC1Q96IZ7 334 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 EPB41L4BQ9H329 900 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 MAP3K20Q9NYL2 800 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 FRMPD4Q14CM0 1322 aa18.47■□□□□ 0.55
SCAMP4-201ENST00000316097 FAM170AA1A519 330 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 PON1P27169 355 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 PPATQ06203 517 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 DCAF17Q5H9S7 520 aaPredicted RBP18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 LBX2Q6XYB7 198 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 NCAPG2Q86XI2 1143 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 NSUN6Q8TEA1 469 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms