RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 AGO2Q9UKV8 859 aaKnown RBP19.86■□□□□ 0.77
CCDC43-201ENST00000315286 PACSIN2Q9UNF0 486 aaPredicted RBP19.86■□□□□ 0.77
CCDC43-201ENST00000315286 CCL15-CCL14A0A0B4J2E2 113 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 ACOT2P49753 483 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 ENPEPQ07075 957 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 C2orf54Q08AI8 447 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 CCL15Q16663 113 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 PLPPR4Q7Z2D5 763 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 GTF3C2Q8WUA4 911 aaPredicted RBP19.85■□□□□ 0.77
CCDC43-201ENST00000315286 SLC20A1Q8WUM9 679 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 ZNF516Q92618 1163 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 ELMO3Q96BJ8 720 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 TMEM134Q9H6X4 195 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 SUGCTQ9HAC7 445 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 KIAA1586Q9HCI6 787 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 ARFGAP3Q9NP61 516 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 RNF216Q9NWF9 866 aaPredicted RBP19.85■□□□□ 0.77
CCDC43-201ENST00000315286 SMARCAL1Q9NZC9 954 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 EHD2Q9NZN4 543 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 ASB14A6NK59 587 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 ZBTB42B2RXF5 422 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 ADCY3O60266 1144 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 USP8P40818 1118 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 MKRN4PQ13434 485 aaPredicted RBP19.85■□□□□ 0.77
CCDC43-201ENST00000315286 PRPF4BQ13523 1007 aaKnown RBP19.85■□□□□ 0.77
CCDC43-201ENST00000315286 PLCB4Q15147 1175 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 IFI16Q16666 785 aaKnown RBP19.85■□□□□ 0.77
CCDC43-201ENST00000315286 ARMCX2Q7L311 632 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 ZNF572Q7Z3I7 529 aaPredicted RBP19.85■□□□□ 0.77
CCDC43-201ENST00000315286 HELQQ8TDG4 1101 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 ATP8B4Q8TF62 1192 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 BRI3BPQ8WY22 251 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 GOLPH3Q9H4A6 298 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 SEPT11Q9NVA2 429 aaKnown RBP19.85■□□□□ 0.77
CCDC43-201ENST00000315286 FAM53CQ9NYF3 392 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 TAS2R14Q9NYV8 317 aa19.85■□□□□ 0.77
CCDC43-201ENST00000315286 A0A0A6YYK5 440 aaPredicted RBP19.84■□□□□ 0.77
CCDC43-201ENST00000315286 LOC102724159A0A0B4J2E5 919 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 FAM170AA1A519 330 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 DNA2P51530 1060 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 GTF2A2P52657 109 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 MFAP3P55082 362 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 WNT7BP56706 349 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 VSNL1P62760 191 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 CCNA1P78396 465 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 TTLL4Q14679 1199 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 PWP2Q15269 919 aaKnown RBP19.84■□□□□ 0.77
CCDC43-201ENST00000315286 SLFN12LQ6IEE8 588 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 CRELD2Q6UXH1 353 aaPredicted RBP19.84■□□□□ 0.77
CCDC43-201ENST00000315286 FAM71AQ8IYT1 594 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 LRRC57Q8N9N7 239 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 TPCN2Q8NHX9 752 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 PPME1Q9Y570 386 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 PLXNA1Q9UIW2 1896 aa19.84■□□□□ 0.77
CCDC43-201ENST00000315286 PSMD6Q15008 389 aa19.83■□□□□ 0.77
CCDC43-201ENST00000315286 ZNF792Q3KQV3 632 aa19.83■□□□□ 0.77
CCDC43-201ENST00000315286 IER5Q5VY09 327 aa19.83■□□□□ 0.77
CCDC43-201ENST00000315286 C15orf39Q6ZRI6 1047 aa19.83■□□□□ 0.77
CCDC43-201ENST00000315286 SPATA4Q8NEY3 305 aa19.83■□□□□ 0.77
CCDC43-201ENST00000315286 TATDN2Q93075 761 aa19.83■□□□□ 0.77
CCDC43-201ENST00000315286 MS4A14Q96JA4 679 aa19.83■□□□□ 0.77
CCDC43-201ENST00000315286 NT5C1BQ96P26 610 aa19.83■□□□□ 0.77
CCDC43-201ENST00000315286 ANKFY1Q9P2R3 1169 aa19.83■□□□□ 0.77
CCDC43-201ENST00000315286 KIAA0391O15091 583 aaKnown RBP19.83■□□□□ 0.76
CCDC43-201ENST00000315286 SGPL1O95470 568 aa19.83■□□□□ 0.76
CCDC43-201ENST00000315286 ADORA2AP29274 412 aa19.83■□□□□ 0.76
CCDC43-201ENST00000315286 CLDN10P78369 228 aa19.83■□□□□ 0.76
CCDC43-201ENST00000315286 ZBTB41Q5SVQ8 909 aa19.83■□□□□ 0.76
CCDC43-201ENST00000315286 CCDC181Q5TID7 509 aa19.83■□□□□ 0.76
CCDC43-201ENST00000315286 LMBRD2Q68DH5 695 aaPredicted RBP19.83■□□□□ 0.76
CCDC43-201ENST00000315286 LRRC71Q8N4P6 559 aa19.83■□□□□ 0.76
CCDC43-201ENST00000315286 SCFD2Q8WU76 684 aa19.83■□□□□ 0.76
CCDC43-201ENST00000315286 SHC3Q92529 594 aa19.83■□□□□ 0.76
CCDC43-201ENST00000315286 PDE11AQ9HCR9 933 aa19.83■□□□□ 0.76
CCDC43-201ENST00000315286 SLC45A1Q9Y2W3 748 aa19.83■□□□□ 0.76
CCDC43-201ENST00000315286 PLXNB2O15031 1838 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 A0A0B4J269 797 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 TTLL13PA6NNM8 815 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 CYP26A1O43174 497 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 TBC1D8O95759 1140 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 TMEM253P0C7T8 217 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 ABCB4P21439 1286 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 MATR3P43243 847 aaKnown RBP eCLIP19.82■□□□□ 0.76
CCDC43-201ENST00000315286 ITIH3Q06033 890 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 RPUSD2Q8IZ73 545 aaKnown RBP19.82■□□□□ 0.76
CCDC43-201ENST00000315286 HNRNPLLQ8WVV9 542 aaKnown RBP19.82■□□□□ 0.76
CCDC43-201ENST00000315286 PI4K2AQ9BTU6 479 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 MSTO1Q9BUK6 570 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 ACP6Q9NPH0 428 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 DIS3Q9Y2L1 958 aaKnown RBP19.82■□□□□ 0.76
CCDC43-201ENST00000315286 IGKV6-21A0A0C4DH24 114 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 SRGAP2CP0DJJ0 459 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 TNNI1P19237 187 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 PAFAH1B1P43034 410 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 LAMTOR4Q0VGL1 99 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 LONRF2Q1L5Z9 754 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 GJC2Q5T442 439 aaPredicted RBP19.82■□□□□ 0.76
CCDC43-201ENST00000315286 WDR93Q6P2C0 686 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 EPS8L1Q8TE68 723 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 TRAPPC12Q8WVT3 735 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms