RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 TAS1R2Q8TE23 839 aa27.25■■□□□ 1.95
HOXB3-201ENST00000311626 PLSCR1O15162 318 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 DLATP10515 647 aaKnown RBP27.24■■□□□ 1.95
HOXB3-201ENST00000311626 FNTAP49354 379 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 GTF2BQ00403 316 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 SP4Q02446 784 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 SNX1Q13596 522 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 KCNV1Q6PIU1 500 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 CCDC105Q8IYK2 499 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 TRIM7Q9C029 511 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 UBIAD1Q9Y5Z9 338 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 TESPA1A2RU30 521 aaPredicted RBP27.24■■□□□ 1.95
HOXB3-201ENST00000311626 FAM187AA6NFU0 413 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 RARAP10276 462 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 HNRNPH1P31943 449 aaKnown RBP27.24■■□□□ 1.95
HOXB3-201ENST00000311626 RPS6P62753 249 aaKnown RBP27.24■■□□□ 1.95
HOXB3-201ENST00000311626 SEL1L2Q5TEA6 688 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 DAB2IPQ5VWQ8 1189 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 FLAD1Q8NFF5 587 aa27.24■■□□□ 1.95
HOXB3-201ENST00000311626 SYNGAP1Q96PV0 1343 aa27.23■■□□□ 1.95
HOXB3-201ENST00000311626 DHX34Q14147 1143 aaKnown RBP27.23■■□□□ 1.95
HOXB3-201ENST00000311626 DENND2CQ68D51 928 aa27.23■■□□□ 1.95
HOXB3-201ENST00000311626 LMBRD2Q68DH5 695 aaPredicted RBP27.23■■□□□ 1.95
HOXB3-201ENST00000311626 AEBP2Q6ZN18 517 aaPredicted RBP27.23■■□□□ 1.95
HOXB3-201ENST00000311626 NEK9Q8TD19 979 aa27.23■■□□□ 1.95
HOXB3-201ENST00000311626 BSNDQ8WZ55 320 aa27.23■■□□□ 1.95
HOXB3-201ENST00000311626 GMLQ99445 158 aa27.23■■□□□ 1.95
HOXB3-201ENST00000311626 DBR1Q9UK59 544 aaKnown RBP27.23■■□□□ 1.95
HOXB3-201ENST00000311626 RFX1P22670 979 aa27.23■■□□□ 1.95
HOXB3-201ENST00000311626 MYBPC2Q14324 1141 aa27.23■■□□□ 1.95
HOXB3-201ENST00000311626 MICALCLQ6ZW33 695 aa27.23■■□□□ 1.95
HOXB3-201ENST00000311626 EPS8L3Q8TE67 593 aaKnown RBP27.23■■□□□ 1.95
HOXB3-201ENST00000311626 C1orf54Q8WWF1 131 aa27.23■■□□□ 1.95
HOXB3-201ENST00000311626 PDGFDQ9GZP0 370 aaPredicted RBP27.23■■□□□ 1.95
HOXB3-201ENST00000311626 PABPC3Q9H361 631 aaKnown RBP27.23■■□□□ 1.95
HOXB3-201ENST00000311626 CYP11B1P15538 503 aa27.22■■□□□ 1.95
HOXB3-201ENST00000311626 SSTR3P32745 418 aaPredicted RBP27.22■■□□□ 1.95
HOXB3-201ENST00000311626 CCDC38Q502W7 563 aa27.22■■□□□ 1.95
HOXB3-201ENST00000311626 TCEAL9Q9UHQ7 104 aa27.22■■□□□ 1.95
HOXB3-201ENST00000311626 RASAL2Q9UJF2 1139 aa27.22■■□□□ 1.95
HOXB3-201ENST00000311626 MIF4GDA9UHW6 222 aaKnown RBP27.22■■□□□ 1.95
HOXB3-201ENST00000311626 CLDN3O15551 220 aa27.22■■□□□ 1.95
HOXB3-201ENST00000311626 CTNNA2P26232 953 aa27.22■■□□□ 1.95
HOXB3-201ENST00000311626 TLCD1Q96CP7 247 aa27.22■■□□□ 1.95
HOXB3-201ENST00000311626 EFCC1Q9HA90 598 aa27.22■■□□□ 1.95
HOXB3-201ENST00000311626 DNAJC17Q9NVM6 304 aaKnown RBP27.22■■□□□ 1.95
HOXB3-201ENST00000311626 DENND3A2RUS2 1198 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 KRT5P13647 590 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 CNGA1P29973 690 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 NPTX2P47972 431 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 FMNL3Q8IVF7 1028 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 SEC16BQ96JE7 1060 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 TBX20Q9UMR3 447 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 CHRNA3P32297 505 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 BYSLQ13895 437 aaKnown RBP27.21■■□□□ 1.95
HOXB3-201ENST00000311626 C6orf89Q6UWU4 347 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 PRPF38AQ8NAV1 312 aaKnown RBP27.21■■□□□ 1.95
HOXB3-201ENST00000311626 HELQQ8TDG4 1101 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 CD101Q93033 1021 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 WNK4Q96J92 1243 aa27.21■■□□□ 1.95
HOXB3-201ENST00000311626 COL2A1P02458 1487 aaPredicted RBP27.21■■□□□ 1.95
HOXB3-201ENST00000311626 CHN1P15882 459 aa27.2■■□□□ 1.95
HOXB3-201ENST00000311626 HADHBP55084 474 aaKnown RBP27.2■■□□□ 1.95
HOXB3-201ENST00000311626 PGM5Q15124 567 aa27.2■■□□□ 1.95
HOXB3-201ENST00000311626 SLC13A5Q86YT5 568 aaPredicted RBP27.2■■□□□ 1.95
HOXB3-201ENST00000311626 PARD3BQ8TEW8 1205 aa27.2■■□□□ 1.95
HOXB3-201ENST00000311626 CCDC113Q9H0I3 377 aa27.2■■□□□ 1.95
HOXB3-201ENST00000311626 COL4A5P29400 1685 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 PLA2G6O60733 806 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 COILP38432 576 aaPredicted RBP27.2■■□□□ 1.94
HOXB3-201ENST00000311626 MFAP3P55082 362 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 PCNX4Q63HM2 1172 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 CPLX4Q7Z7G2 160 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 TMEM161BQ8NDZ6 487 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 SHC3Q92529 594 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 PCDHA3Q9Y5H8 950 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 CTNND1O60716 968 aaKnown RBP27.2■■□□□ 1.94
HOXB3-201ENST00000311626 TRIP13Q15645 432 aaPredicted RBP27.2■■□□□ 1.94
HOXB3-201ENST00000311626 ICE2Q659A1 982 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 SLC39A4Q6P5W5 647 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 MMS22LQ6ZRQ5 1243 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 ANO5Q75V66 913 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 C12orf56Q8IXR9 622 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 SUPT20HQ8NEM7 779 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 RMDN3Q96TC7 470 aa27.2■■□□□ 1.94
HOXB3-201ENST00000311626 PFASO15067 1338 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 FOXO6A8MYZ6 492 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 P4HA2O15460 535 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 ASNSP08243 561 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 SIX1Q15475 284 aaPredicted RBP27.19■■□□□ 1.94
HOXB3-201ENST00000311626 ATG4AQ8WYN0 398 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 CABS1Q96KC9 395 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 RPS6KC1Q96S38 1066 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 PAGR1Q9BTK6 254 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 MTFR1LQ9H019 292 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 NCKAP1LP55160 1127 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 KRT39Q6A163 491 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 FAM118BQ9BPY3 351 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 OSBPL7Q9BZF2 842 aa27.19■■□□□ 1.94
HOXB3-201ENST00000311626 MAPTP10636 758 aaKnown RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms