RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 ADAM7Q9H2U9 754 aa21.57■■□□□ 1.04
LIME1-201ENST00000309546 FZD8Q9H461 694 aa21.57■■□□□ 1.04
LIME1-201ENST00000309546 MRPL17Q9NRX2 175 aaKnown RBP21.57■■□□□ 1.04
LIME1-201ENST00000309546 USP20Q9Y2K6 914 aa21.57■■□□□ 1.04
LIME1-201ENST00000309546 TTLL13PA6NNM8 815 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 PP2D1A8MPX8 630 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 H3BQV1 296 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 N4BP3O15049 544 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 SOD2P04179 222 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 GJB2P29033 226 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 PDIA5Q14554 519 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 FAM187BQ17R55 369 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 KANK3Q6NY19 840 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 CABP7Q86V35 215 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 PPFIBP1Q86W92 1011 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 IGSF22Q8N9C0 903 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 SLC22A17Q8WUG5 538 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 EDAQ92838 391 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 IFT74Q96LB3 600 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 NECTIN4Q96NY8 510 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 KLHL5Q96PQ7 755 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 POMKQ9H5K3 350 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 PDZD7Q9H5P4 517 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.56■■□□□ 1.04
LIME1-201ENST00000309546 STK24Q9Y6E0 443 aa21.56■■□□□ 1.04
LIME1-201ENST00000309546 F8W810 466 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 LAD1O00515 517 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 CNPP09543 421 aaKnown RBP21.55■■□□□ 1.04
LIME1-201ENST00000309546 PLA2G5P39877 138 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 GRIK3Q13003 919 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 KRT79Q5XKE5 535 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 DTHD1Q6ZMT9 781 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 ZBTB33Q86T24 672 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 GSTCDQ8NEC7 633 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 RIPOR3Q96MK2 946 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 ADPGKQ9BRR6 497 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 COLEC11Q9BWP8 271 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 CCDC113Q9H0I3 377 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 NR2E1Q9Y466 385 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 PLXNA3P51805 1871 aa21.55■■□□□ 1.04
LIME1-201ENST00000309546 E9PMD0 336 aa21.54■■□□□ 1.04
LIME1-201ENST00000309546 CDC25AP30304 524 aa21.54■■□□□ 1.04
LIME1-201ENST00000309546 MTHFRP42898 656 aa21.54■■□□□ 1.04
LIME1-201ENST00000309546 GLUD2P49448 558 aa21.54■■□□□ 1.04
LIME1-201ENST00000309546 ZRSR1Q15695 479 aaKnown RBP21.54■■□□□ 1.04
LIME1-201ENST00000309546 RILPL1Q5EBL4 403 aa21.54■■□□□ 1.04
LIME1-201ENST00000309546 HFE2Q6ZVN8 426 aa21.54■■□□□ 1.04
LIME1-201ENST00000309546 TAS1R1Q7RTX1 841 aa21.54■■□□□ 1.04
LIME1-201ENST00000309546 RABGGTAQ92696 567 aa21.54■■□□□ 1.04
LIME1-201ENST00000309546 KIFAP3Q92845 792 aa21.54■■□□□ 1.04
LIME1-201ENST00000309546 TECTAO75443 2155 aa21.54■■□□□ 1.04
LIME1-201ENST00000309546 ZMYM2Q9UBW7 1377 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 ACKR2O00590 384 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 EDN1P05305 212 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 PRPHP41219 470 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 CLCN4P51793 760 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 ZXDAP98168 799 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 IL17AQ16552 155 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 EEF1DP3Q658K8 133 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 KIAA1841Q6NSI8 718 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 TMC5Q6UXY8 1006 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 FBXL18Q96ME1 805 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 SFXN1Q9H9B4 322 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 SNTG2Q9NY99 539 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 CACNG4Q9UBN1 327 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 DNM3Q9UQ16 869 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 SMC3Q9UQE7 1217 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 SSX2IPQ9Y2D8 614 aa21.53■■□□□ 1.04
LIME1-201ENST00000309546 C2orf16Q68DN1 1984 aa21.52■■□□□ 1.04
LIME1-201ENST00000309546 DENND4AQ7Z401 1863 aa21.52■■□□□ 1.04
LIME1-201ENST00000309546 LILRB3O75022 631 aa21.52■■□□□ 1.04
LIME1-201ENST00000309546 RECQL4O94761 1208 aa21.52■■□□□ 1.04
LIME1-201ENST00000309546 MCM2P49736 904 aa21.52■■□□□ 1.04
LIME1-201ENST00000309546 ATAT1Q5SQI0 421 aa21.52■■□□□ 1.04
LIME1-201ENST00000309546 FUT10Q6P4F1 479 aa21.52■■□□□ 1.04
LIME1-201ENST00000309546 TRIM67Q6ZTA4 783 aa21.52■■□□□ 1.04
LIME1-201ENST00000309546 RNF168Q8IYW5 571 aaPredicted RBP21.52■■□□□ 1.04
LIME1-201ENST00000309546 FEZF2Q8TBJ5 459 aa21.52■■□□□ 1.04
LIME1-201ENST00000309546 B3GALT6Q96L58 329 aa21.52■■□□□ 1.04
LIME1-201ENST00000309546 GDAQ9Y2T3 454 aa21.52■■□□□ 1.04
LIME1-201ENST00000309546 MYH11P35749 1972 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 TMEM221A6NGB7 291 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 CASTOR2A6NHX0 329 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 CCDC169A6NNP5 214 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 C2CD4DB7Z1M9 353 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 M0R296 226 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 TEX28O15482 410 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 ADH1AP07327 375 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 EFNA5P52803 228 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 PEX3P56589 373 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 ATP2C1P98194 919 aaPredicted RBP21.51■■□□□ 1.03
LIME1-201ENST00000309546 PTPN21Q16825 1174 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 HASPINQ8TF76 798 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 TBC1D32Q96NH3 1257 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 RUSC1Q9BVN2 902 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 ADAM28Q9UKQ2 775 aa21.51■■□□□ 1.03
LIME1-201ENST00000309546 HIP1RO75146 1068 aa21.5■■□□□ 1.03
LIME1-201ENST00000309546 MYBP10242 640 aa21.5■■□□□ 1.03
LIME1-201ENST00000309546 DCAF4L1Q3SXM0 396 aa21.5■■□□□ 1.03
LIME1-201ENST00000309546 KCNK18Q7Z418 384 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms