RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 OR52A5Q9H2C5 316 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 ACBD3Q9H3P7 528 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 PLSCR3Q9NRY6 295 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 DCDC2Q9UHG0 476 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 APOBEC2Q9Y235 224 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 MRFAP1Q9Y605 127 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 C2orf78A6NCI8 922 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TLR4O00206 839 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 NDC80O14777 642 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 KDM1AO60341 852 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 NBNO60934 754 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 NPHP4O75161 1426 aaPredicted RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 USP2O75604 605 aaPredicted RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 INHAP05111 366 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TSPY3P0CV98 308 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 GLI3P10071 1580 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 EPB41P11171 864 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 PTPN1P18031 435 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 EMDP50402 254 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TSPY1Q01534 308 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 CALD1Q05682 793 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 GALNT2Q10471 571 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 RESTQ13127 1097 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 ODF1Q14990 250 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 OASLQ15646 514 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 HYAL4Q2M3T9 481 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 SYTL3Q4VX76 610 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 COLEC12Q5KU26 742 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 FAM162BQ5T6X4 162 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 NEK5Q6P3R8 708 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 DENND1BQ6P3S1 775 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 SEZ6L2Q6UXD5 910 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TSHZ1Q6ZSZ6 1077 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 FASTKD5Q7L8L6 764 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 KRT78Q8N1N4 520 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 IQUBQ8NA54 791 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 MBD3L2Q8NHZ7 208 aaPredicted RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 PMFBP1Q8TBY8 1022 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 SEPT8Q92599 483 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 YIPF3Q9GZM5 350 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 IPPKQ9H8X2 491 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 LIPT1Q9Y234 373 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 POLHQ9Y253 713 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 CHST2Q9Y4C5 530 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 ADAMTS7Q9UKP4 1686 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 CPS1P31327 1500 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 PREX2Q70Z35 1606 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 MED14O60244 1454 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 PXDNQ92626 1479 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 SHANK2Q9UPX8 1470 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 ATP8B3O60423 1300 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 SOS2Q07890 1332 aaPredicted RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 AQP7O14520 342 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 ADAM12O43184 909 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 GRID2O43424 1007 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 SLC26A4O43511 780 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 ECE2O60344 883 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 SCN2BO60939 215 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 IRF1P10914 325 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 ATP5DP30049 168 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 SLC8A1P32418 973 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TMPOP42166 694 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 IRX3P78415 501 aaPredicted RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 DAB2P98082 770 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TBC1D8BQ0IIM8 1120 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 GRB14Q14449 540 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 GRB7Q14451 532 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 CCDC96Q2M329 555 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 PLK5Q496M5 336 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TMEM31Q5JXX7 168 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 SPATA1Q5VX52 437 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 FAM117BQ6P1L5 589 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TMEM154Q6P9G4 183 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TMPRSS9Q7Z410 1059 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 GPC2Q8N158 579 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 L3MBTL4Q8NA19 623 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 ATG4CQ96DT6 458 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 C11orf24Q96F05 449 aaPredicted RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 BSCL2Q96G97 398 aaPredicted RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 RPL10LQ96L21 214 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 RTFDC1Q9BY42 306 aaPredicted RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 PCIF1Q9H4Z3 704 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 EML4Q9HC35 981 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 GTF2A1LQ9UNN4 478 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 C3P01024 1663 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 CEP162Q5TB80 1403 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 RRBP1Q9P2E9 1410 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 GSTTP1A0A1W2PQM5 241 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 MEIS3P2A8K0S8 358 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TRAF3IP2O43734 574 aaPredicted RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 TADA2AO75478 443 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 LMNAP02545 664 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 RPL10P27635 214 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 RASSF2P50749 326 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 ARL4CP56559 192 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 NFX1Q12986 1120 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 GALNT3Q14435 633 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TOR1AIP1Q5JTV8 583 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 PLEKHS1Q5SXH7 462 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 C11orf87Q6NUJ2 197 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms