RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 FERP16591 822 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 GCLMP48507 274 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 MXI1P50539 228 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 EFNA5P52803 228 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 GFPT1Q06210 699 aaPredicted RBP12.89□□□□□ -0.35
TRIM40-205ENST00000307859 CETN1Q12798 172 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 KIF5AQ12840 1032 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 HSP90AA2PQ14568 343 aaPredicted RBP12.89□□□□□ -0.35
TRIM40-205ENST00000307859 TAF1CQ15572 869 aaPredicted RBP12.89□□□□□ -0.35
TRIM40-205ENST00000307859 SLC18A3Q16572 532 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 DUSP28Q4G0W2 176 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 SLFN12LQ6IEE8 588 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 USP37Q86T82 979 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 GPIHBP1Q8IV16 184 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 FMNL3Q8IVF7 1028 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 PRPF31Q8WWY3 499 aaKnown RBP12.89□□□□□ -0.35
TRIM40-205ENST00000307859 GPR88Q9GZN0 384 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 DNAJC12Q9UKB3 198 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 GUCA1BQ9UMX6 200 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 TFR2Q9UP52 801 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 TRPC6Q9Y210 931 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 COQ4Q9Y3A0 265 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 MRFAP1Q9Y605 127 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 PTCH2Q9Y6C5 1203 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 SZT2Q5T011 3432 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 ATP8B3O60423 1300 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.88□□□□□ -0.35
TRIM40-205ENST00000307859 EDN1P05305 212 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 HOXC6P09630 235 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 SOX5P35711 763 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 STAT1P42224 750 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 CLDN10P78369 228 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 LAMTOR4Q0VGL1 99 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 MAP2K5Q13163 448 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 ACVR2BQ13705 512 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 ZNF484Q5JVG2 852 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 IQSEC1Q6DN90 963 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 C17orf99Q6UX52 265 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 ZPBP2Q6X784 338 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 TXLNBQ8N3L3 684 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 AFG1LQ8WV93 481 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 VTI1AQ96AJ9 217 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 COL25A1Q9BXS0 654 aaPredicted RBP12.88□□□□□ -0.35
TRIM40-205ENST00000307859 HAPLN2Q9GZV7 340 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 RNPEPQ9H4A4 650 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 TMEM8AQ9HCN3 771 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 ZNF215Q9UL58 517 aaPredicted RBP12.88□□□□□ -0.35
TRIM40-205ENST00000307859 HTTP42858 3142 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 A0A0B4J269 797 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 CTAGE9A4FU28 777 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 ZNF233A6NK53 670 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 PPFIA4O75335 1185 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 GFPT2O94808 682 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 C22orf31O95567 290 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 SMPD1P17405 629 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 MAGEA1P43355 309 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 ARID5AQ03989 594 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 PTK2Q05397 1052 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 TUBB2AQ13885 445 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 DRAP1Q14919 205 aaPredicted RBP12.88□□□□□ -0.35
TRIM40-205ENST00000307859 PSMD6Q15008 389 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 KRT39Q6A163 491 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 PHLDB3Q6NSJ2 640 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 ZNF571Q7Z3V5 609 aaPredicted RBP12.88□□□□□ -0.35
TRIM40-205ENST00000307859 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 TRAPPC12Q8WVT3 735 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 USP6NLQ92738 828 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 NAPGQ99747 312 aaPredicted RBP12.88□□□□□ -0.35
TRIM40-205ENST00000307859 FAM213AQ9BRX8 229 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 C16orf70Q9BSU1 422 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 TUBB2BQ9BVA1 445 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 TARS2Q9BW92 718 aaKnown RBP12.88□□□□□ -0.35
TRIM40-205ENST00000307859 C2orf40Q9H1Z8 148 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 SUGCTQ9HAC7 445 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
TRIM40-205ENST00000307859 AGO2Q9UKV8 859 aaKnown RBP12.88□□□□□ -0.35
TRIM40-205ENST00000307859 NENFQ9UMX5 172 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 STXBP5LQ9Y2K9 1186 aa12.88□□□□□ -0.35
TRIM40-205ENST00000307859 TRIP12Q14669 1992 aaPredicted RBP12.87□□□□□ -0.35
TRIM40-205ENST00000307859 CITO14578 2027 aa12.87□□□□□ -0.35
TRIM40-205ENST00000307859 A0A087X0T9 212 aa12.87□□□□□ -0.35
TRIM40-205ENST00000307859 SOX1O00570 391 aaPredicted RBP12.87□□□□□ -0.35
TRIM40-205ENST00000307859 MSCO60682 206 aa12.87□□□□□ -0.35
TRIM40-205ENST00000307859 FAM228BP0C875 321 aa12.87□□□□□ -0.35
TRIM40-205ENST00000307859 GPC3P51654 580 aa12.87□□□□□ -0.35
TRIM40-205ENST00000307859 CAP1Q01518 475 aa12.87□□□□□ -0.35
TRIM40-205ENST00000307859 CRELD2Q6UXH1 353 aaPredicted RBP12.87□□□□□ -0.35
TRIM40-205ENST00000307859 C15orf39Q6ZRI6 1047 aa12.87□□□□□ -0.35
TRIM40-205ENST00000307859 ZBTB8OSQ8IWT0 167 aa12.87□□□□□ -0.35
TRIM40-205ENST00000307859 LINC01465Q8N7H1 131 aa12.87□□□□□ -0.35
TRIM40-205ENST00000307859 CCDC127Q96BQ5 260 aa12.87□□□□□ -0.35
TRIM40-205ENST00000307859 SUCLA2Q9P2R7 463 aaPredicted RBP12.87□□□□□ -0.35
TRIM40-205ENST00000307859 MAGEB2O15479 319 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 ASAP2O43150 1006 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 EVI5O60447 810 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 LDHAP00338 332 aaKnown RBP12.86□□□□□ -0.35
TRIM40-205ENST00000307859 MMP3P08254 477 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 INSRRP14616 1297 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 NLRP11P59045 1033 aaKnown RBP12.86□□□□□ -0.35
TRIM40-205ENST00000307859 TFDP1Q14186 410 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms