RNA–Protein interactions for RNA: ENST00000307180.4

TSNARE1-201, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSNARE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-201ENST00000307180 SFMBT2Q5VUG0 894 aa17.24■□□□□ 0.35
TSNARE1-201ENST00000307180 MYCT1Q8N699 235 aa17.24■□□□□ 0.35
TSNARE1-201ENST00000307180 LMBR1Q8WVP7 490 aa17.24■□□□□ 0.35
TSNARE1-201ENST00000307180 ATP6V0A1Q93050 837 aa17.24■□□□□ 0.35
TSNARE1-201ENST00000307180 TOX2Q96NM4 488 aa17.24■□□□□ 0.35
TSNARE1-201ENST00000307180 LXNQ9BS40 222 aa17.24■□□□□ 0.35
TSNARE1-201ENST00000307180 OLFML3Q9NRN5 406 aa17.24■□□□□ 0.35
TSNARE1-201ENST00000307180 SAR1BQ9Y6B6 198 aa17.24■□□□□ 0.35
TSNARE1-201ENST00000307180 SSU72P8A0A1W2PR75 194 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 TREHO43280 583 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 CD4P01730 458 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 CLTBP09497 229 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 RPL13P26373 211 aaKnown RBP17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 SLC26A2P50443 739 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 PTPN11Q06124 597 aaPredicted RBP17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 ASTE1Q2TB18 679 aaPredicted RBP17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 HGSNATQ68CP4 663 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 CC2D1AQ6P1N0 951 aaPredicted RBP17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 SESTD1Q86VW0 696 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 ATP8B4Q8TF62 1192 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 SECISBP2LQ93073 1101 aaKnown RBP17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 SEZ6LQ9BYH1 1024 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 TMEM39AQ9NV64 488 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 TRIP12Q14669 1992 aaPredicted RBP17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 MACROD2A1Z1Q3 448 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 HBP1O60381 514 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 NR3C1P04150 777 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 OATP04181 439 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 SERPING1P05155 500 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 PNMA6AP0CW24 399 aaPredicted RBP17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 MAGEA1P43355 309 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 GPIHBP1Q8IV16 184 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 NRCAMQ92823 1304 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 ANKZF1Q9H8Y5 726 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 PDLIM7Q9NR12 457 aa17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 SEPT9Q9UHD8 586 aaPredicted RBP17.23■□□□□ 0.35
TSNARE1-201ENST00000307180 KAT6AQ92794 2004 aa17.22■□□□□ 0.35
TSNARE1-201ENST00000307180 ATP8B1O43520 1251 aa17.22■□□□□ 0.35
TSNARE1-201ENST00000307180 SEC31AO94979 1220 aaKnown RBP17.22■□□□□ 0.35
TSNARE1-201ENST00000307180 APBA1Q02410 837 aa17.22■□□□□ 0.35
TSNARE1-201ENST00000307180 BRD3Q15059 726 aa17.22■□□□□ 0.35
TSNARE1-201ENST00000307180 PPP1R12CQ9BZL4 782 aa17.22■□□□□ 0.35
TSNARE1-201ENST00000307180 PARVGQ9HBI0 331 aa17.22■□□□□ 0.35
TSNARE1-201ENST00000307180 METTL14Q9HCE5 456 aaKnown RBP17.22■□□□□ 0.35
TSNARE1-201ENST00000307180 NRBP2Q9NSY0 501 aa17.22■□□□□ 0.35
TSNARE1-201ENST00000307180 ANO9A1A5B4 782 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 TRIM43BA6NCK2 446 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 RBAK-RBAKDNI3L0D1 243 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 EIF3DO15371 548 aaKnown RBP eCLIP17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 AKAP3O75969 853 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 AFPP02771 609 aaKnown RBP17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 KCNA1Q09470 495 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 PLA2G4FQ68DD2 849 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 MSANTD4Q8NCY6 345 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 TRIM43Q96BQ3 446 aaPredicted RBP17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 ARFGAP3Q9NP61 516 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 PRKAG2Q9UGJ0 569 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 CLIC2O15247 247 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 SLC16A3O15427 465 aaKnown RBP17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 PJA2O43164 708 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 TGFB1I1O43294 461 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 TACC1O75410 805 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 STBD1O95210 358 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 GNAT1P11488 350 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 NMT1P30419 496 aaKnown RBP17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 MTERF2Q49AM1 385 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 XKR3Q5GH77 459 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 MARCH8Q5T0T0 291 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 WNT8BQ93098 351 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 FAM167AQ96KS9 214 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 GANQ9H2C0 597 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 AIPL1Q9NZN9 384 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 KCND2Q9NZV8 630 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 SEL1LQ9UBV2 794 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 NR2E3Q9Y5X4 410 aa17.21■□□□□ 0.35
TSNARE1-201ENST00000307180 UMODL1Q5DID0 1318 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 CCDC151A5D8V7 595 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 ZBTB42B2RXF5 422 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 SRGAP2O75044 1071 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 EPB41P11171 864 aaKnown RBP17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 ITGB8P26012 769 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 HOXC8P31273 242 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 CASP4P49662 377 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 ZNF131P52739 623 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 ADAM17P78536 824 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 GFPT1Q06210 699 aaPredicted RBP17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 TDRD12Q587J7 1177 aaKnown RBP17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 DPY19L2P1Q6NXN4 242 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 ANO5Q75V66 913 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 TRIM58Q8NG06 486 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 RAB21Q9UL25 225 aa17.2■□□□□ 0.34
TSNARE1-201ENST00000307180 RRN3P2A6NIE6 340 aa17.19■□□□□ 0.34
TSNARE1-201ENST00000307180 DKC1O60832 514 aaKnown RBP eCLIP17.19■□□□□ 0.342e-11■■■■■ 51.5
TSNARE1-201ENST00000307180 SLC9A1P19634 815 aa17.19■□□□□ 0.34
TSNARE1-201ENST00000307180 KLRC1P26715 233 aa17.19■□□□□ 0.34
TSNARE1-201ENST00000307180 YWHABP31946 246 aaKnown RBP17.19■□□□□ 0.34
TSNARE1-201ENST00000307180 NPEPPSP55786 919 aa17.19■□□□□ 0.34
TSNARE1-201ENST00000307180 ZC2HC1CQ53FD0 456 aaPredicted RBP17.19■□□□□ 0.34
TSNARE1-201ENST00000307180 ZNF484Q5JVG2 852 aa17.19■□□□□ 0.34
TSNARE1-201ENST00000307180 RUFY4Q6ZNE9 571 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms