RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 GRM1Q13255 1194 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 ACVR2BQ13705 512 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 MAPK6Q16659 721 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 TMEM63BQ5T3F8 832 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 ALKBH5Q6P6C2 394 aaKnown RBP11.47□□□□□ -0.57
CLP1-201ENST00000302731 SV2AQ7L0J3 742 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 SRGAP1Q7Z6B7 1085 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 SAPCD2Q86UD0 394 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 IFNLR1Q8IU57 520 aaPredicted RBP11.47□□□□□ -0.57
CLP1-201ENST00000302731 ZNF710Q8N1W2 664 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 SLC30A5Q8TAD4 765 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 TSC1Q92574 1164 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 UBXN4Q92575 508 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 CCDC127Q96BQ5 260 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 MAP7D2Q96T17 732 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 SUGCTQ9HAC7 445 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 UBE2TQ9NPD8 197 aaPredicted RBP11.47□□□□□ -0.57
CLP1-201ENST00000302731 RAB20Q9NX57 234 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 SAR1BQ9Y6B6 198 aa11.47□□□□□ -0.57
CLP1-201ENST00000302731 A0A0A6YYK5 440 aaPredicted RBP11.46□□□□□ -0.57
CLP1-201ENST00000302731 FOXN3O00409 490 aaPredicted RBP11.46□□□□□ -0.57
CLP1-201ENST00000302731 IGF2BP3O00425 579 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLP1-201ENST00000302731 ACKR2O00590 384 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 CLDN3O15551 220 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 C22orf31O95567 290 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 AP3M2P53677 418 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 GCNT1Q02742 428 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 MAP2K1Q02750 393 aaPredicted RBP11.46□□□□□ -0.57
CLP1-201ENST00000302731 TAF1CQ15572 869 aaPredicted RBP11.46□□□□□ -0.57
CLP1-201ENST00000302731 IFI16Q16666 785 aaKnown RBP11.46□□□□□ -0.57
CLP1-201ENST00000302731 KIAA0753Q2KHM9 967 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 ZACNQ401N2 412 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 EFCAB12Q6NXP0 572 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 C17orf99Q6UX52 265 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 CRELD2Q6UXH1 353 aaPredicted RBP11.46□□□□□ -0.57
CLP1-201ENST00000302731 RSRC2Q7L4I2 434 aaKnown RBP11.46□□□□□ -0.57
CLP1-201ENST00000302731 ARHGEF19Q8IW93 802 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 LINC01465Q8N7H1 131 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 RNF149Q8NC42 400 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 NPLOC4Q8TAT6 608 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 AFG1LQ8WV93 481 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 NT5C1BQ96P26 610 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 FNBP1Q96RU3 617 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 C16orf70Q9BSU1 422 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 MSTO1Q9BUK6 570 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 FZD8Q9H461 694 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 RNPEPQ9H4A4 650 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 TSKSQ9UJT2 592 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 CAPN6Q9Y6Q1 641 aa11.46□□□□□ -0.57
CLP1-201ENST00000302731 DCAF8L1A6NGE4 600 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 DDX3XO00571 662 aaKnown RBP eCLIP11.46□□□□□ -0.58
CLP1-201ENST00000302731 C4BPAP04003 597 aaKnown RBP11.46□□□□□ -0.58
CLP1-201ENST00000302731 PRKCBP05771 671 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 SLC10A3P09131 477 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 INSRRP14616 1297 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 SMPD1P17405 629 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 NLRP11P59045 1033 aaKnown RBP11.46□□□□□ -0.58
CLP1-201ENST00000302731 PTENP60484 403 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 MCL1Q07820 350 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 SURF1Q15526 300 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 ENOX2Q16206 610 aaKnown RBP11.46□□□□□ -0.58
CLP1-201ENST00000302731 FAM187BQ17R55 369 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 IFNL1Q8IU54 200 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 FAM71AQ8IYT1 594 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 LRRC71Q8N4P6 559 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 OLIG1Q8TAK6 271 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 HELQQ8TDG4 1101 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 TAS1R2Q8TE23 839 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 SHC3Q92529 594 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 RABGGTAQ92696 567 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 GOLGA1Q92805 767 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 SEMA4DQ92854 862 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 RPGRIP1Q96KN7 1286 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 ACO2Q99798 780 aaKnown RBP11.46□□□□□ -0.58
CLP1-201ENST00000302731 HAPLN2Q9GZV7 340 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 RBAKQ9NYW8 714 aaPredicted RBP11.46□□□□□ -0.58
CLP1-201ENST00000302731 CPA4Q9UI42 421 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 PCDHGC5Q9Y5F6 944 aa11.46□□□□□ -0.58
CLP1-201ENST00000302731 PASKQ96RG2 1323 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 H3BRB1 525 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 MOCS3O95396 460 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 ATP1A1P05023 1023 aaKnown RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 MMP3P08254 477 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 H2AFZP0C0S5 128 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 DLATP10515 647 aaKnown RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 PROZP22891 400 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 KLRC1P26715 233 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 TMOD1P28289 359 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 CHMP4BP1P59074 171 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 POU5F1Q01860 360 aaKnown RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 CKAP4Q07065 602 aaKnown RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 PRPF4BQ13523 1007 aaKnown RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 DGKDQ16760 1214 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 ARHGAP44Q17R89 818 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 ERCC6LQ2NKX8 1250 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 GJC2Q5T442 439 aaPredicted RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 OLFML2BQ68BL8 750 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 TSHZ1Q6ZSZ6 1077 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 H2AFVQ71UI9 128 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms