RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 CBWD2Q8IUF1 395 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 SLC20A1Q8WUM9 679 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 NACA2Q9H009 215 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 POLR3FQ9H1D9 316 aaPredicted RBP15.77■□□□□ 0.12
CDH23-202ENST00000299366 SMYD3Q9H7B4 428 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 DDX4Q9NQI0 724 aaKnown RBP15.77■□□□□ 0.12
CDH23-202ENST00000299366 CFAP69A5D8W1 941 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 HSPA6P17066 643 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 PON1P27169 355 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 RPA1P27694 616 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 RINT1Q6NUQ1 792 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 RPAINQ86UA6 219 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 OR6B3Q8NGW1 331 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 IFT122Q9HBG6 1241 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 NUB1Q9Y5A7 615 aa15.77■□□□□ 0.12
CDH23-202ENST00000299366 PRPSAP2O60256 369 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 ZBED1O96006 694 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 CCND2P30279 289 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 GABPAQ06546 454 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 TRADDQ15628 312 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 SNRNP35Q16560 246 aaKnown RBP15.77■□□□□ 0.11
CDH23-202ENST00000299366 SHROOM1Q2M3G4 852 aaPredicted RBP15.77■□□□□ 0.11
CDH23-202ENST00000299366 C1orf228Q6PIY5 440 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 TSEN2Q8NCE0 465 aaKnown RBP15.77■□□□□ 0.11
CDH23-202ENST00000299366 PPP1R36Q96LQ0 422 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 PNMA5Q96PV4 448 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 TOPORSQ9NS56 1045 aaPredicted RBP15.77■□□□□ 0.11
CDH23-202ENST00000299366 CNTRLQ7Z7A1 2325 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 WEE2P0C1S8 567 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 ESRRAP11474 423 aaPredicted RBP15.77■□□□□ 0.11
CDH23-202ENST00000299366 ARSEP51690 589 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 TMPRSS15P98073 1019 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 WDR72Q3MJ13 1102 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 EP400NLQ6ZTU2 488 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 CENPUQ71F23 418 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 DPP9Q86TI2 863 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 PPP4R1Q8TF05 950 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 CCDC124Q96CT7 223 aaKnown RBP15.77■□□□□ 0.11
CDH23-202ENST00000299366 TLR10Q9BXR5 811 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 RTFDC1Q9BY42 306 aaPredicted RBP15.77■□□□□ 0.11
CDH23-202ENST00000299366 STK33Q9BYT3 514 aa15.77■□□□□ 0.11
CDH23-202ENST00000299366 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.77■□□□□ 0.11
CDH23-202ENST00000299366 ZNF568Q3ZCX4 644 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 ARHGAP24Q8N264 748 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 FAF2Q96CS3 445 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 SSX2IPQ9Y2D8 614 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 REXO2Q9Y3B8 237 aaKnown RBP15.76■□□□□ 0.11
CDH23-202ENST00000299366 PEAK1Q9H792 1746 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 CSDE1O75534 798 aaKnown RBP15.76■□□□□ 0.11
CDH23-202ENST00000299366 CASP5P51878 434 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 EPHB1P54762 984 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 MAP7D3Q8IWC1 876 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 SP8Q8IXZ3 490 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 DTX3LQ8TDB6 740 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 GJD4Q96KN9 370 aaPredicted RBP15.76■□□□□ 0.11
CDH23-202ENST00000299366 RAB3IPQ96QF0 476 aaPredicted RBP15.76■□□□□ 0.11
CDH23-202ENST00000299366 JCADQ9P266 1359 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 ADAMTS3O15072 1205 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 PSMC1P62191 440 aaKnown RBP15.76■□□□□ 0.11
CDH23-202ENST00000299366 ZNF699Q32M78 642 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 ZNF667Q5HYK9 610 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 SH2D4BQ5SQS7 431 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 AADACL2Q6P093 401 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 LRRC43Q8N309 656 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 BBOF1Q8ND07 529 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 EPS8L3Q8TE67 593 aaKnown RBP15.76■□□□□ 0.11
CDH23-202ENST00000299366 EPN3Q9H201 632 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 KLC4Q9NSK0 619 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 BLOC1S4Q9NUP1 217 aa15.76■□□□□ 0.11
CDH23-202ENST00000299366 AGO2Q9UKV8 859 aaKnown RBP15.76■□□□□ 0.11
CDH23-202ENST00000299366 RIMBP3CA6NJZ7 1639 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 RIMBP3BA6NNM3 1639 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 RIMBP3Q9UFD9 1639 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 CHUKO15111 745 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 YY1P25490 414 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 CHRNA3P32297 505 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 RGS7P49802 495 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 EN1Q05925 392 aaPredicted RBP15.75■□□□□ 0.11
CDH23-202ENST00000299366 FOXD4Q12950 439 aaPredicted RBP15.75■□□□□ 0.11
CDH23-202ENST00000299366 KCNH7Q9NS40 1196 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 AFG3L2Q9Y4W6 797 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 PPFIA2O75334 1257 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 FXR2P51116 673 aaKnown RBP eCLIP15.75■□□□□ 0.11
CDH23-202ENST00000299366 POLE2P56282 527 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 EPHA7Q15375 998 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 RNF149Q8NC42 400 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 TMEM35BQ8NCS4 154 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 TPCN2Q8NHX9 752 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 GSDMBQ8TAX9 411 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 GBP5Q96PP8 586 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 MTRQ99707 1265 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 RPAP3Q9H6T3 665 aaPredicted RBP15.75■□□□□ 0.11
CDH23-202ENST00000299366 CYP4F11Q9HBI6 524 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 SLC38A10Q9HBR0 1119 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 SGPL1O95470 568 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 WDR59Q6PJI9 974 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 TARS2Q9BW92 718 aaKnown RBP15.75■□□□□ 0.11
CDH23-202ENST00000299366 AGPAT3Q9NRZ7 376 aa15.75■□□□□ 0.11
CDH23-202ENST00000299366 OVOS2A0A0G2JMS6 1433 aa15.74■□□□□ 0.11
CDH23-202ENST00000299366 KRT10P13645 584 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms