RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 PDLIM7Q9NR12 457 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 NRBP2Q9NSY0 501 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 KBTBD4Q9NVX7 518 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 SUCLA2Q9P2R7 463 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 ZMYND8Q9ULU4 1186 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 AKT3Q9Y243 479 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 PCDHA5Q9Y5H7 936 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 CDY2AQ9Y6F7 541 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 COL1A2P08123 1366 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 ZMYM2Q9UBW7 1377 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 IGKV6-21A0A0C4DH24 114 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 SYCE3A1L190 88 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 MEN1O00255 615 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 B4GALT5O43286 388 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 KPNA6O60684 536 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 PRPF6O94906 941 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 F11P03951 625 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 RPN1P04843 607 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 SRGAP2CP0DJJ0 459 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 GHRP10912 638 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 SYN1P17600 705 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 BMP6P22004 513 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 ITGB8P26012 769 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 CYP2C18P33260 490 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 ARL2P36404 184 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 THPOP40225 353 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 RFC5P40937 340 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 PEX3P56589 373 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 KCNA1Q09470 495 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 MBTPS1Q14703 1052 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 SNX17Q15036 470 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 ZC2HC1CQ53FD0 456 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 CCDC183Q5T5S1 534 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 SLC39A5Q6ZMH5 540 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 C11orf57Q6ZUT1 292 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 TAS1R3Q7RTX0 852 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 SERINC5Q86VE9 423 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 NELFCDQ8IXH7 590 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 TMEM130Q8N3G9 435 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 PRPF31Q8WWY3 499 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 SCLYQ96I15 445 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 FAM84AQ96KN4 292 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 FIZ1Q96SL8 496 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 C7orf25Q9BPX7 421 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 WNT8AQ9H1J5 351 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 TNMDQ9H2S6 317 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 MINDY3Q9H8M7 445 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 SLC39A2Q9NP94 309 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 EXOC1Q9NV70 894 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 PANK4Q9NVE7 773 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 MAPK8IP1Q9UQF2 711 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 NOD1Q9Y239 953 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 COL4A3BPQ9Y5P4 624 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 SCN5AQ14524 2016 aa7.17□□□□□ -1.26
DEPDC4-201ENST00000299185 LTBP2Q14767 1821 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 A0A087WZ62 844 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 FRMD3A2A2Y4 597 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 TRIM43BA6NCK2 446 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 CCDC169A6NNP5 214 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 SHISA8B8ZZ34 492 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 SLC26A4O43511 780 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 DKC1O60832 514 aaKnown RBP eCLIP7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 CABYRO75952 493 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 CD4P01730 458 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 HARSP12081 509 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 MUTP22033 750 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 GUCY2CP25092 1073 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 NPTX2P47972 431 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 SLC26A2P50443 739 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 CDK7P50613 346 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 GPC3P51654 580 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 CCL23P55773 120 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 NLRP11P59045 1033 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 MRPS6P82932 125 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 MGAT3Q09327 533 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 FAAP100Q0VG06 881 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 LAMTOR4Q0VGL1 99 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 STK4Q13043 487 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 GRIN2CQ14957 1233 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 KLHL40Q2TBA0 621 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 DPCR1Q3MIW9 517 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 FAM26FQ5R3K3 315 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 ZNF618Q5T7W0 954 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 EEF1DP3Q658K8 133 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 UNC13DQ70J99 1090 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 OTUD6AQ7L8S5 288 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 NECAB2Q7Z6G3 386 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 SESTD1Q86VW0 696 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 MYCT1Q8N699 235 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 GOLGA6L1Q8N7Z2 621 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 RNF149Q8NC42 400 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 ZSWIM2Q8NEG5 633 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 EPS8L1Q8TE68 723 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 EDARADDQ8WWZ3 215 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 SLC7A3Q8WY07 619 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 SMARCE1Q969G3 411 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 TRIM43Q96BQ3 446 aaPredicted RBP7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 CPB2Q96IY4 423 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 MAP7D2Q96T17 732 aa7.16□□□□□ -1.26
DEPDC4-201ENST00000299185 FDXACB1Q9BRP7 624 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms