RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 STAG3L1P0CL83 205 aa24.71■■□□□ 1.55
LINC01116-201ENST00000295549 ATF7P17544 494 aaPredicted RBP24.71■■□□□ 1.55
LINC01116-201ENST00000295549 ADSSP30520 456 aa24.71■■□□□ 1.55
LINC01116-201ENST00000295549 PRCPP42785 496 aa24.71■■□□□ 1.55
LINC01116-201ENST00000295549 ISM2Q6H9L7 571 aa24.71■■□□□ 1.55
LINC01116-201ENST00000295549 CAVIN1Q6NZI2 390 aaKnown RBP24.71■■□□□ 1.55
LINC01116-201ENST00000295549 HAPLN2Q9GZV7 340 aa24.71■■□□□ 1.55
LINC01116-201ENST00000295549 KCTD10Q9H3F6 313 aa24.71■■□□□ 1.55
LINC01116-201ENST00000295549 MICAL3Q7RTP6 2002 aa24.71■■□□□ 1.55
LINC01116-201ENST00000295549 TISP43B9A030 160 aa24.7■■□□□ 1.55
LINC01116-201ENST00000295549 ATP2A2P16615 1042 aaKnown RBP24.7■■□□□ 1.55
LINC01116-201ENST00000295549 GARTP22102 1010 aa24.7■■□□□ 1.55
LINC01116-201ENST00000295549 PPP1R2P41236 205 aa24.7■■□□□ 1.55
LINC01116-201ENST00000295549 HS2ST1Q7LGA3 356 aa24.7■■□□□ 1.55
LINC01116-201ENST00000295549 ADSSL1Q8N142 457 aa24.7■■□□□ 1.55
LINC01116-201ENST00000295549 GOLGA5Q8TBA6 731 aa24.7■■□□□ 1.55
LINC01116-201ENST00000295549 PGBD4Q96DM1 585 aa24.7■■□□□ 1.55
LINC01116-201ENST00000295549 MAPK8IP1Q9UQF2 711 aa24.7■■□□□ 1.55
LINC01116-201ENST00000295549 TTC3P53804 2025 aa24.7■■□□□ 1.55
LINC01116-201ENST00000295549 A0A1W2PPC1 479 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 PDXKO00764 312 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 ZBTB33Q86T24 672 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 HACE1Q8IYU2 909 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 TMEM174Q8WUU8 243 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 TYW1Q9NV66 732 aaKnown RBP24.69■■□□□ 1.54
LINC01116-201ENST00000295549 LRFN2Q9ULH4 789 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 GJB5O95377 273 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 MATR3P43243 847 aaKnown RBP eCLIP24.69■■□□□ 1.54
LINC01116-201ENST00000295549 STIM1Q13586 685 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 KYAT1Q16773 422 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 POMGNT1Q8WZA1 660 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 NXF3Q9H4D5 531 aaKnown RBP24.69■■□□□ 1.54
LINC01116-201ENST00000295549 UBN1Q9NPG3 1134 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 AGPAT3Q9NRZ7 376 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 HES2Q9Y543 173 aa24.69■■□□□ 1.54
LINC01116-201ENST00000295549 KIAA0391O15091 583 aaKnown RBP24.68■■□□□ 1.54
LINC01116-201ENST00000295549 FAM189A1O60320 539 aa24.68■■□□□ 1.54
LINC01116-201ENST00000295549 UPP2O95045 317 aa24.68■■□□□ 1.54
LINC01116-201ENST00000295549 GRM5P41594 1212 aa24.68■■□□□ 1.54
LINC01116-201ENST00000295549 AGMOQ6ZNB7 445 aa24.68■■□□□ 1.54
LINC01116-201ENST00000295549 HERC6Q8IVU3 1022 aa24.68■■□□□ 1.54
LINC01116-201ENST00000295549 C12orf56Q8IXR9 622 aa24.68■■□□□ 1.54
LINC01116-201ENST00000295549 MSTO1Q9BUK6 570 aa24.68■■□□□ 1.54
LINC01116-201ENST00000295549 RNF39Q9H2S5 420 aa24.68■■□□□ 1.54
LINC01116-201ENST00000295549 AGO2Q9UKV8 859 aaKnown RBP24.68■■□□□ 1.54
LINC01116-201ENST00000295549 TRAF3IP3Q9Y228 551 aa24.68■■□□□ 1.54
LINC01116-201ENST00000295549 PPP1R3GB7ZBB8 358 aa24.67■■□□□ 1.54
LINC01116-201ENST00000295549 OGTO15294 1046 aa24.67■■□□□ 1.54
LINC01116-201ENST00000295549 HOXA2O43364 376 aa24.67■■□□□ 1.54
LINC01116-201ENST00000295549 ITGA4P13612 1032 aa24.67■■□□□ 1.54
LINC01116-201ENST00000295549 CENPPQ6IPU0 288 aa24.67■■□□□ 1.54
LINC01116-201ENST00000295549 RNF169Q8NCN4 708 aa24.67■■□□□ 1.54
LINC01116-201ENST00000295549 DHTKD1Q96HY7 919 aaPredicted RBP24.67■■□□□ 1.54
LINC01116-201ENST00000295549 CBWD1Q9BRT8 395 aa24.67■■□□□ 1.54
LINC01116-201ENST00000295549 GIT1Q9Y2X7 761 aa24.67■■□□□ 1.54
LINC01116-201ENST00000295549 DGKIO75912 1065 aa24.66■■□□□ 1.54
LINC01116-201ENST00000295549 LETM1O95202 739 aaPredicted RBP24.66■■□□□ 1.54
LINC01116-201ENST00000295549 HARSP12081 509 aaKnown RBP24.66■■□□□ 1.54
LINC01116-201ENST00000295549 CD44P16070 742 aaKnown RBP24.66■■□□□ 1.54
LINC01116-201ENST00000295549 IBSPP21815 317 aaPredicted RBP24.66■■□□□ 1.54
LINC01116-201ENST00000295549 NLRP12P59046 1061 aa24.66■■□□□ 1.54
LINC01116-201ENST00000295549 ARMCX5Q6P1M9 558 aa24.66■■□□□ 1.54
LINC01116-201ENST00000295549 TMCO2Q7Z6W1 182 aaPredicted RBP24.66■■□□□ 1.54
LINC01116-201ENST00000295549 THNSL1Q8IYQ7 743 aa24.66■■□□□ 1.54
LINC01116-201ENST00000295549 CEP120Q8N960 986 aa24.66■■□□□ 1.54
LINC01116-201ENST00000295549 MLKLQ8NB16 471 aa24.66■■□□□ 1.54
LINC01116-201ENST00000295549 RSPH1Q8WYR4 309 aa24.66■■□□□ 1.54
LINC01116-201ENST00000295549 LPPQ93052 612 aa24.66■■□□□ 1.54
LINC01116-201ENST00000295549 SEMA6BQ9H3T3 888 aa24.66■■□□□ 1.54
LINC01116-201ENST00000295549 RNF19AQ9NV58 838 aa24.66■■□□□ 1.54
LINC01116-201ENST00000295549 SNTG2Q9NY99 539 aa24.66■■□□□ 1.54
LINC01116-201ENST00000295549 COLQQ9Y215 455 aaPredicted RBP24.66■■□□□ 1.54
LINC01116-201ENST00000295549 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.65■■□□□ 1.54
LINC01116-201ENST00000295549 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.65■■□□□ 1.54
LINC01116-201ENST00000295549 MEIS3P2A8K0S8 358 aa24.65■■□□□ 1.54
LINC01116-201ENST00000295549 PSMA7O14818 248 aa24.65■■□□□ 1.54
LINC01116-201ENST00000295549 LDHAP00338 332 aaKnown RBP24.65■■□□□ 1.54
LINC01116-201ENST00000295549 CLTAP09496 248 aa24.65■■□□□ 1.54
LINC01116-201ENST00000295549 HTRA4P83105 476 aaPredicted RBP24.65■■□□□ 1.54
LINC01116-201ENST00000295549 NFIL3Q16649 462 aa24.65■■□□□ 1.54
LINC01116-201ENST00000295549 ZCWPW2Q504Y3 356 aa24.65■■□□□ 1.54
LINC01116-201ENST00000295549 ZNF689Q96CS4 500 aaPredicted RBP24.65■■□□□ 1.54
LINC01116-201ENST00000295549 CCDC94Q9BW85 323 aaPredicted RBP24.65■■□□□ 1.54
LINC01116-201ENST00000295549 RSAD1Q9HA92 442 aa24.65■■□□□ 1.54
LINC01116-201ENST00000295549 RC3H2Q9HBD1 1191 aaKnown RBP24.65■■□□□ 1.54
LINC01116-201ENST00000295549 LAMA3Q16787 3333 aa24.65■■□□□ 1.54
LINC01116-201ENST00000295549 CALUO43852 315 aaPredicted RBP24.64■■□□□ 1.54
LINC01116-201ENST00000295549 FGFR1P11362 822 aa24.64■■□□□ 1.54
LINC01116-201ENST00000295549 AKAP5P24588 427 aa24.64■■□□□ 1.54
LINC01116-201ENST00000295549 POU5F1Q01860 360 aaKnown RBP24.64■■□□□ 1.54
LINC01116-201ENST00000295549 MYBPC2Q14324 1141 aa24.64■■□□□ 1.54
LINC01116-201ENST00000295549 CLLU1OSQ5K130 101 aa24.64■■□□□ 1.54
LINC01116-201ENST00000295549 SLC9A9Q8IVB4 645 aa24.64■■□□□ 1.54
LINC01116-201ENST00000295549 ACAP3Q96P50 834 aa24.64■■□□□ 1.54
LINC01116-201ENST00000295549 RAD9AQ99638 391 aa24.64■■□□□ 1.54
LINC01116-201ENST00000295549 ZBED2Q9BTP6 218 aa24.64■■□□□ 1.54
LINC01116-201ENST00000295549 APOL6Q9BWW8 343 aa24.64■■□□□ 1.54
LINC01116-201ENST00000295549 HSPBP1Q9NZL4 362 aa24.64■■□□□ 1.54
LINC01116-201ENST00000295549 INSL6Q9Y581 213 aa24.64■■□□□ 1.54
LINC01116-201ENST00000295549 CLIC2O15247 247 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms