RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 TMEM206Q9H813 350 aa8.18□□□□□ -1.1
TRIM42-201ENST00000286349 RNF186Q9NXI6 227 aa8.18□□□□□ -1.1
TRIM42-201ENST00000286349 C6orf203Q9P0P8 240 aaPredicted RBP8.18□□□□□ -1.1
TRIM42-201ENST00000286349 LARSQ9P2J5 1176 aaKnown RBP8.18□□□□□ -1.1
TRIM42-201ENST00000286349 G3BP2Q9UN86 482 aaKnown RBP8.18□□□□□ -1.1
TRIM42-201ENST00000286349 SCINQ9Y6U3 715 aa8.18□□□□□ -1.1
TRIM42-201ENST00000286349 CTAGE15A4D2H0 777 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 RBAK-RBAKDNI3L0D1 243 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 ATP2A1O14983 1001 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 PJA2O43164 708 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 TACC1O75410 805 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 PRPF6O94906 941 aaKnown RBP8.17□□□□□ -1.1
TRIM42-201ENST00000286349 TBC1D8O95759 1140 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CTAGE8P0CG41 777 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CA8P35219 290 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 RANBP1P43487 201 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 PLA2G4AP47712 749 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 QARSP47897 775 aaKnown RBP8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CLCN6P51797 869 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CASP5P51878 434 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 RPS6P62753 249 aaKnown RBP8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CAP1Q01518 475 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CRHR2Q13324 411 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 PGM5Q15124 567 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 ARHGEF16Q5VV41 709 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 PAPD7Q5XG87 772 aaKnown RBP8.17□□□□□ -1.1
TRIM42-201ENST00000286349 TMCO3Q6UWJ1 677 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 ZNF720Q7Z2F6 126 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CTAGE6Q86UF2 777 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 MFN1Q8IWA4 741 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CTAGE4Q8IX94 777 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 RNF10Q8N5U6 811 aaKnown RBP8.17□□□□□ -1.1
TRIM42-201ENST00000286349 ANKK1Q8NFD2 765 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 VMP1Q96GC9 406 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CDHR1Q96JP9 859 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 MUC3BQ9H195 1237 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 AIPL1Q9NZN9 384 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 ARHGAP20Q9P2F6 1191 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CPA4Q9UI42 421 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 PCDHA13Q9Y5I0 950 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 ASTN1O14525 1302 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 RSPH10B2B2RC85 870 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 EIF3FO00303 357 aaPredicted RBP8.17□□□□□ -1.1
TRIM42-201ENST00000286349 RSPH10BP0C881 870 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 IL4RP24394 825 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CCND2P30279 289 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 EIF4A3P38919 411 aaKnown RBP8.17□□□□□ -1.1
TRIM42-201ENST00000286349 MAGEA10P43363 369 aaPredicted RBP8.17□□□□□ -1.1
TRIM42-201ENST00000286349 EXOC3L4Q17RC7 722 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 ODR4Q5SWX8 454 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CDCA2Q69YH5 1023 aaPredicted RBP8.17□□□□□ -1.1
TRIM42-201ENST00000286349 SLC9A9Q8IVB4 645 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 C4orf19Q8IY42 314 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 USP33Q8TEY7 942 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 GPRASP2Q96D09 838 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 CCDC43Q96MW1 224 aaKnown RBP8.17□□□□□ -1.1
TRIM42-201ENST00000286349 SLC7A5P2Q9GIP4 190 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 GBP3Q9H0R5 595 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 KIF9Q9HAQ2 790 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 ZCCHC17Q9NP64 241 aaKnown RBP8.17□□□□□ -1.1
TRIM42-201ENST00000286349 PXMP2Q9NR77 195 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 UBAP1Q9NZ09 502 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 COL20A1Q9P218 1284 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 SAR1BQ9Y6B6 198 aa8.17□□□□□ -1.1
TRIM42-201ENST00000286349 ATP8B3O60423 1300 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 WDR64B1ANS9 1081 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 DHX15O43143 795 aaKnown RBP8.16□□□□□ -1.1
TRIM42-201ENST00000286349 CA12O43570 354 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 TLR2O60603 784 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 TRPA1O75762 1119 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 PRLRP16471 622 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 MCM3P25205 808 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 HOXD13P35453 343 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 SH3BGRP55822 239 aaPredicted RBP8.16□□□□□ -1.1
TRIM42-201ENST00000286349 POLR2FP61218 127 aaKnown RBP8.16□□□□□ -1.1
TRIM42-201ENST00000286349 AMPD2Q01433 879 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 TAF1CQ15572 869 aaPredicted RBP8.16□□□□□ -1.1
TRIM42-201ENST00000286349 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRIM42-201ENST00000286349 TDRD12Q587J7 1177 aaKnown RBP8.16□□□□□ -1.1
TRIM42-201ENST00000286349 PADI6Q6TGC4 694 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 TRAPPC11Q7Z392 1133 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 PLPP6Q8IY26 295 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 CCDC155Q8N6L0 562 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 ANKRD13CQ8N6S4 541 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 SMYD1Q8NB12 490 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 RMDN3Q96TC7 470 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 MPHOSPH6Q99547 160 aaKnown RBP8.16□□□□□ -1.1
TRIM42-201ENST00000286349 PDCD2LQ9BRP1 358 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 ANKEF1Q9NU02 776 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 TSKSQ9UJT2 592 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 SAMM50Q9Y512 469 aa8.16□□□□□ -1.1
TRIM42-201ENST00000286349 A0A0U1RQJ8 604 aa8.15□□□□□ -1.1
TRIM42-201ENST00000286349 EPHB6O15197 1021 aa8.15□□□□□ -1.1
TRIM42-201ENST00000286349 ATP6V1G1O75348 118 aa8.15□□□□□ -1.1
TRIM42-201ENST00000286349 ZNF189O75820 626 aaPredicted RBP8.15□□□□□ -1.1
TRIM42-201ENST00000286349 AKAP3O75969 853 aa8.15□□□□□ -1.1
TRIM42-201ENST00000286349 NOL4O94818 638 aa8.15□□□□□ -1.1
TRIM42-201ENST00000286349 TCF3P15923 654 aa8.15□□□□□ -1.1
TRIM42-201ENST00000286349 RFX1P22670 979 aa8.15□□□□□ -1.1
TRIM42-201ENST00000286349 CTGFP29279 349 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms