RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 COL4A3BPQ9Y5P4 624 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 ZNF536O15090 1300 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 NFIBO00712 420 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 MEIS2O14770 477 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 SHBGP04278 402 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 ALAS1P13196 640 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 ITGA4P13612 1032 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 FKBP3Q00688 224 aaKnown RBP11.29□□□□□ -0.6
ERCC3-201ENST00000285398 GRB10Q13322 594 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 NOL9Q5SY16 702 aaKnown RBP11.29□□□□□ -0.6
ERCC3-201ENST00000285398 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 FBF1Q8TES7 1133 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 DYDC1Q8WWB3 177 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 R3HDMLQ9H3Y0 253 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 RXFP1Q9HBX9 757 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 CCPG1Q9ULG6 757 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 LRRC42Q9Y546 428 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 BZW2Q9Y6E2 419 aaKnown RBP11.29□□□□□ -0.6
ERCC3-201ENST00000285398 DOCK1Q14185 1865 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 EDIL3O43854 480 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 CCNT1O60563 726 aaKnown RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 SKIV2L2P42285 1042 aaKnown RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 TECP42680 631 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 IFNAR2P48551 515 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 GNPTABQ3T906 1256 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 ZCWPW2Q504Y3 356 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 ASRGL1Q7L266 308 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 KRT25Q7Z3Z0 450 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 DAAM2Q86T65 1068 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 ZFAND2BQ8WV99 257 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 CELF4Q9BZC1 486 aaKnown RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 RANBP17Q9H2T7 1088 aaKnown RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 AZI2Q9H6S1 392 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 PPP1R9AQ9ULJ8 1098 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 A8MUI8 341 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 TDP2O95551 362 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 GNAT1P11488 350 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 CNGA1P29973 690 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 MXRA7P84157 204 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 PSMD2Q13200 908 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 GRM1Q13255 1194 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 SNX1Q13596 522 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 ENOX2Q16206 610 aaKnown RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 SLC30A10Q6XR72 485 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 GALNT15Q8N3T1 639 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 KIF2BQ8N4N8 673 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 TPCN2Q8NHX9 752 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 ATP8B4Q8TF62 1192 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 SLC10A4Q96EP9 437 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 TRIM31Q9BZY9 425 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 ARL2BPQ9Y2Y0 163 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 DPPA5A6NC42 116 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 VWA5AO00534 786 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 NPTXRO95502 500 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 GNA14O95837 355 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 IFI35P80217 286 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 POU5F1Q01860 360 aaKnown RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 LBRQ14739 615 aaKnown RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 NONOQ15233 471 aaKnown RBP eCLIP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 CNGA2Q16280 664 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 CMPK2Q5EBM0 449 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 TRIM68Q6AZZ1 485 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 ERO1BQ86YB8 467 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 LARP4BQ92615 738 aaKnown RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 ERP44Q9BS26 406 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 TMEM109Q9BVC6 243 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 EPB41L4BQ9H329 900 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 GOLPH3Q9H4A6 298 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 GBA2Q9HCG7 927 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 GGT7Q9UJ14 662 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 TTC7AQ9ULT0 858 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-201ENST00000285398 SYNPO2Q9UMS6 1093 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 DAAM1Q9Y4D1 1078 aa11.28□□□□□ -0.6
ERCC3-201ENST00000285398 OTOFQ9HC10 1997 aa11.27□□□□□ -0.6
ERCC3-201ENST00000285398 SPDYE5A6NIY4 337 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 ITGBL1O95965 494 aaPredicted RBP11.27□□□□□ -0.61
ERCC3-201ENST00000285398 PCK1P35558 622 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 PTENP60484 403 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 DR1Q01658 176 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 ORC2Q13416 577 aaPredicted RBP11.27□□□□□ -0.61
ERCC3-201ENST00000285398 SLC29A2Q14542 456 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 SLFN11Q7Z7L1 901 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 NEK8Q86SG6 692 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 DRAXINQ8NBI3 349 aaPredicted RBP11.27□□□□□ -0.61
ERCC3-201ENST00000285398 PNMA5Q96PV4 448 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 NAP1L3Q99457 506 aaPredicted RBP11.27□□□□□ -0.61
ERCC3-201ENST00000285398 GANQ9H2C0 597 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 SLC38A10Q9HBR0 1119 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 GPBP1L1Q9HC44 474 aaPredicted RBP11.27□□□□□ -0.61
ERCC3-201ENST00000285398 ZDHHC18Q9NUE0 388 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 DIS3Q9Y2L1 958 aaKnown RBP11.27□□□□□ -0.61
ERCC3-201ENST00000285398 ATP8B3O60423 1300 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 FAM187AA6NFU0 413 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 SPDYE3A6NKU9 549 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 SMIM23A6NLE4 172 aa11.27□□□□□ -0.61
ERCC3-201ENST00000285398 SLC37A4O43826 429 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms