RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 IRX5P78411 483 aaPredicted RBP17.77■□□□□ 0.43
TPM1-201ENST00000267996 PRKCZQ05513 592 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 MCL1Q07820 350 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 SLC9C1Q4G0N8 1177 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 ZNF662Q6ZS27 426 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 IRF2BP2Q7Z5L9 587 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 KIAA0319LQ8IZA0 1049 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 CCDC42Q96M95 316 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 PTPRHQ9HD43 1115 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 APEX2Q9UBZ4 518 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 NRCAMQ92823 1304 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 MBLAC1A4D2B0 266 aaPredicted RBP17.76■□□□□ 0.43
TPM1-201ENST00000267996 CLDN3O15551 220 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 SMIM10L2AP0DMW4 78 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 SMIM10L2BP0DMW5 78 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 EIF4A3P38919 411 aaKnown RBP17.76■□□□□ 0.43
TPM1-201ENST00000267996 PSEN2P49810 448 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 NKX3-2P78367 333 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 KRT83P78385 493 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 RAPGEF1Q13905 1077 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 MFSD10Q14728 455 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 ASIC2Q16515 512 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 FSCN1Q16658 493 aaKnown RBP17.76■□□□□ 0.43
TPM1-201ENST00000267996 KIAA0753Q2KHM9 967 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 KRT39Q6A163 491 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 GJB7Q6PEY0 223 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 C15orf39Q6ZRI6 1047 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 LMBR1Q8WVP7 490 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 STK33Q9BYT3 514 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 MINDY3Q9H8M7 445 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 SETD4Q9NVD3 440 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 PRMT7Q9NVM4 692 aaPredicted RBP17.76■□□□□ 0.43
TPM1-201ENST00000267996 ANKFY1Q9P2R3 1169 aa17.76■□□□□ 0.43
TPM1-201ENST00000267996 A0A0U1RQJ8 604 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 INO80B-WBP1J3KQ70 363 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 MAP2K2P36507 400 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 PRKCIP41743 596 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 ARHGAP25P42331 645 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 ACOT2P49753 483 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 GJA9P57773 515 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 ADAM17P78536 824 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 AMHR2Q16671 573 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 PHLDB3Q6NSJ2 640 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 ATRIPQ8WXE1 791 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 SPAG5Q96R06 1193 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 MAP7D2Q96T17 732 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 POP1Q99575 1024 aaKnown RBP17.75■□□□□ 0.43
TPM1-201ENST00000267996 INO80BQ9C086 356 aaPredicted RBP17.75■□□□□ 0.43
TPM1-201ENST00000267996 UPF3AQ9H1J1 476 aaKnown RBP17.75■□□□□ 0.43
TPM1-201ENST00000267996 DNAJC12Q9UKB3 198 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 AKT3Q9Y243 479 aa17.75■□□□□ 0.43
TPM1-201ENST00000267996 A0A087WZ62 844 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 ZNF263O14978 683 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 KPNA6O60684 536 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 VTNP04004 478 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 IQCF3P0C7M6 154 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 GPC3P51654 580 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 KIF11P52732 1056 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 BEX3Q00994 111 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 PRPF4BQ13523 1007 aaKnown RBP17.74■□□□□ 0.43
TPM1-201ENST00000267996 KIF22Q14807 665 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 ZBTB41Q5SVQ8 909 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 NFRKBQ6P4R8 1299 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 SV2AQ7L0J3 742 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 ZNF410Q86VK4 478 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 ZNF668Q96K58 619 aaPredicted RBP17.74■□□□□ 0.43
TPM1-201ENST00000267996 FDXACB1Q9BRP7 624 aaPredicted RBP17.74■□□□□ 0.43
TPM1-201ENST00000267996 TOPORSQ9NS56 1045 aaPredicted RBP17.74■□□□□ 0.43
TPM1-201ENST00000267996 TNFSF13BQ9Y275 285 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 BZW2Q9Y6E2 419 aaKnown RBP17.74■□□□□ 0.43
TPM1-201ENST00000267996 CNTNAP2Q9UHC6 1331 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 RBAK-RBAKDNI3L0D1 243 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 OGTO15294 1046 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 MYL3P08590 195 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 HOXC8P31273 242 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 WNT7BP56706 349 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 MAP2K1Q02750 393 aaPredicted RBP17.74■□□□□ 0.43
TPM1-201ENST00000267996 ATF7IP2Q5U623 682 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 MPZL3Q6UWV2 235 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 BRSK2Q8IWQ3 736 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 ZNF784Q8NCA9 323 aaPredicted RBP17.74■□□□□ 0.43
TPM1-201ENST00000267996 ZNF516Q92618 1163 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 SEMA4DQ92854 862 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 VTI1AQ96AJ9 217 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 PRIMPOLQ96LW4 560 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 KATNAL1Q9BW62 490 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 GPR88Q9GZN0 384 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 RNF186Q9NXI6 227 aa17.74■□□□□ 0.43
TPM1-201ENST00000267996 RBAKQ9NYW8 714 aaPredicted RBP17.74■□□□□ 0.43
TPM1-201ENST00000267996 SMIM35A0A1B0GVV1 85 aa17.73■□□□□ 0.43
TPM1-201ENST00000267996 F8VZ95 297 aa17.73■□□□□ 0.43
TPM1-201ENST00000267996 SEPT4O43236 478 aa17.73■□□□□ 0.43
TPM1-201ENST00000267996 B4GALT5O43286 388 aa17.73■□□□□ 0.43
TPM1-201ENST00000267996 ZEB2O60315 1214 aa17.73■□□□□ 0.43
TPM1-201ENST00000267996 DLATP10515 647 aaKnown RBP17.73■□□□□ 0.43
TPM1-201ENST00000267996 STAT1P42224 750 aa17.73■□□□□ 0.43
TPM1-201ENST00000267996 MATR3P43243 847 aaKnown RBP eCLIP17.73■□□□□ 0.43
TPM1-201ENST00000267996 PURAQ00577 322 aaKnown RBP17.73■□□□□ 0.43
TPM1-201ENST00000267996 CDC42EP1Q00587 391 aa17.73■□□□□ 0.43
TPM1-201ENST00000267996 HIC1Q14526 733 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms