RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 TUFT1Q9NNX1 390 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 NDE1Q9NXR1 346 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 OR6P1Q8NGX9 317 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 ZNF668Q96K58 619 aaPredicted RBP20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 ISCA1Q9BUE6 129 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 SLC13A1Q9BZW2 595 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 TYK2P29597 1187 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 AP2B1P63010 937 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 SPATA17Q96L03 361 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 AGPAT1Q99943 283 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 SPON2Q9BUD6 331 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 PYGLP06737 847 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 CYFIP1Q7L576 1253 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 SLC26A7Q8TE54 656 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 C1orf54Q8WWF1 131 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 SHROOM2Q13796 1616 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 PDXKO00764 312 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 APOL1O14791 398 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 BTBD8Q5XKL5 378 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 NBPF10Q6P3W6 841 aaKnown RBP20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 TRIM54Q9BYV2 358 aa20.47■□□□□ 0.87
NECTIN1-201ENST00000264025 PPP1R12AO14974 1030 aaPredicted RBP20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 NLRP14Q86W24 1093 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 SUFUQ9UMX1 484 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 MYO1DO94832 1006 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 UBA6A0AVT1 1052 aaPredicted RBP20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 E2F4Q16254 413 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 TSC22D3Q99576 134 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 SIK2Q9H0K1 926 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 CHUKO15111 745 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 SLC1A1P43005 524 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 RAD51Q06609 339 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 NCAPHQ15003 741 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 MMS22LQ6ZRQ5 1243 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 KIF17Q9P2E2 1029 aa20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 PRDM15P57071 1507 aaPredicted RBP20.46■□□□□ 0.87
NECTIN1-201ENST00000264025 KIAA0391O15091 583 aaKnown RBP20.45■□□□□ 0.87
NECTIN1-201ENST00000264025 FASTKD1Q53R41 847 aaKnown RBP20.45■□□□□ 0.87
NECTIN1-201ENST00000264025 TTC30AQ86WT1 665 aa20.45■□□□□ 0.87
NECTIN1-201ENST00000264025 TNIP3Q96KP6 325 aa20.45■□□□□ 0.87
NECTIN1-201ENST00000264025 FAM161BQ96MY7 647 aa20.45■□□□□ 0.87
NECTIN1-201ENST00000264025 ASB14A6NK59 587 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 KIF28PB7ZC32 967 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 AKR1B1P15121 316 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 TTC30BQ8N4P2 665 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 PIK3R2O00459 728 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 SLC16A3O15427 465 aaKnown RBP20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 CCDC22O60826 627 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 KRT17Q04695 432 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 PDIA5Q14554 519 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 TAS2R42Q7RTR8 314 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 LDHDQ86WU2 507 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 ARHGEF1Q92888 912 aaKnown RBP20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 OTUD5Q96G74 571 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 TIPINQ9BVW5 301 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 NDFIP2Q9NV92 336 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 CHCHD3Q9NX63 227 aaKnown RBP20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 RTN2O75298 545 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 ATP6V1E1P36543 226 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 ARSEP51690 589 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 ZNF235Q14590 738 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 GRAMD1AQ96CP6 724 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 FBXL5Q9UKA1 691 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 MRFAP1Q9Y605 127 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 CDK17Q00537 523 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 ACCSLQ4AC99 568 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 KCNV1Q6PIU1 500 aa20.45■□□□□ 0.86
NECTIN1-201ENST00000264025 MYO1CO00159 1063 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 ATP1A1P05023 1023 aaKnown RBP20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 RALAP11233 206 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 CPB1P15086 417 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 YWHABP31946 246 aaKnown RBP20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 MAPRE2Q15555 327 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 PID1Q7Z2X4 250 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 RNPC3Q96LT9 517 aaKnown RBP20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 LRRC23Q53EV4 343 aaPredicted RBP20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 CEP55Q53EZ4 464 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 FAM84BQ96KN1 310 aaPredicted RBP20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 LRRC14Q15048 493 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 DCAF4L1Q3SXM0 396 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 MFSD14CQ5VZR4 134 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 ANKRD40Q6AI12 368 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 RNF135Q8IUD6 432 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 NAF1Q96HR8 494 aaKnown RBP20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 CHGBP05060 677 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 STAG2Q8N3U4 1231 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 CEP70Q8NHQ1 597 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 RPAP3Q9H6T3 665 aaPredicted RBP20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 COG4Q9H9E3 785 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 JPH1Q9HDC5 661 aaPredicted RBP20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 TARSL2A2RTX5 802 aaKnown RBP20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 FOXN1O15353 648 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 RBBP7Q16576 425 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 ANO5Q75V66 913 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 ETNK1Q9HBU6 452 aa20.44■□□□□ 0.86
NECTIN1-201ENST00000264025 ANKRD65E5RJM6 399 aa20.43■□□□□ 0.86
NECTIN1-201ENST00000264025 HIF1AQ16665 826 aa20.43■□□□□ 0.86
NECTIN1-201ENST00000264025 ECT2Q9H8V3 914 aa20.43■□□□□ 0.86
NECTIN1-201ENST00000264025 DFFAO00273 331 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms