RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 ICAM3P32942 547 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 STAT1P42224 750 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 NPTX2P47972 431 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 PEX3P56589 373 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 RTP1P59025 263 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 DRAP1Q14919 205 aaPredicted RBP19.16■□□□□ 0.66
SSB-201ENST00000260956 PHLDB3Q6NSJ2 640 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 ALKBH5Q6P6C2 394 aaKnown RBP19.16■□□□□ 0.66
SSB-201ENST00000260956 ZNF467Q7Z7K2 595 aaPredicted RBP19.16■□□□□ 0.66
SSB-201ENST00000260956 CCDC60Q8IWA6 550 aaPredicted RBP19.16■□□□□ 0.66
SSB-201ENST00000260956 KATNBL1Q9H079 304 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 DNAJC12Q9UKB3 198 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 TNRC18O15417 2968 aaPredicted RBP19.15■□□□□ 0.66
SSB-201ENST00000260956 A0A0A6YYK5 440 aaPredicted RBP19.15■□□□□ 0.66
SSB-201ENST00000260956 CAPN15O75808 1086 aa19.15■□□□□ 0.66
SSB-201ENST00000260956 C2orf54Q08AI8 447 aa19.15■□□□□ 0.66
SSB-201ENST00000260956 ENOX2Q16206 610 aaKnown RBP19.15■□□□□ 0.66
SSB-201ENST00000260956 MFSD14CQ5VZR4 134 aa19.15■□□□□ 0.66
SSB-201ENST00000260956 XXYLT1Q8NBI6 393 aa19.15■□□□□ 0.66
SSB-201ENST00000260956 SPATA4Q8NEY3 305 aa19.15■□□□□ 0.66
SSB-201ENST00000260956 FBXL18Q96ME1 805 aa19.15■□□□□ 0.66
SSB-201ENST00000260956 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.15■□□□□ 0.66
SSB-201ENST00000260956 SUGCTQ9HAC7 445 aa19.15■□□□□ 0.66
SSB-201ENST00000260956 GABBR1Q9UBS5 961 aa19.15■□□□□ 0.66
SSB-201ENST00000260956 MYH9P35579 1960 aaKnown RBP19.15■□□□□ 0.66
SSB-201ENST00000260956 EMSYQ7Z589 1322 aa19.15■□□□□ 0.66
SSB-201ENST00000260956 ANKRD63C9JTQ0 380 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 VAMP7P51809 220 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 GLIPR1L2Q4G1C9 344 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 ARMCX2Q7L311 632 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 SLFN11Q7Z7L1 901 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 CDHR1Q96JP9 859 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 IWS1Q96ST2 819 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.14■□□□□ 0.66
SSB-201ENST00000260956 PCIF1Q9H4Z3 704 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 C17orf75Q9HAS0 396 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 JPH1Q9HDC5 661 aaPredicted RBP19.14■□□□□ 0.66
SSB-201ENST00000260956 SMARCAL1Q9NZC9 954 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 EHD2Q9NZN4 543 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 TBX20Q9UMR3 447 aa19.14■□□□□ 0.66
SSB-201ENST00000260956 ADCY6O43306 1168 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 ERLIN1O75477 346 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 ATG7O95352 703 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 ZNF865P0CJ78 1059 aaPredicted RBP19.14■□□□□ 0.65
SSB-201ENST00000260956 EN2P19622 333 aaPredicted RBP19.14■□□□□ 0.65
SSB-201ENST00000260956 ALDH5A1P51649 535 aaPredicted RBP19.14■□□□□ 0.65
SSB-201ENST00000260956 ACTR2P61160 394 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 SP2Q02086 613 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 TMEM63BQ5T3F8 832 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 LHX8Q68G74 356 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 TAS1R3Q7RTX0 852 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 RUBCNQ92622 972 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 KIFAP3Q92845 792 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 ATP6V0A1Q93050 837 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 DEFB118Q96PH6 123 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 CEP89Q96ST8 783 aa19.14■□□□□ 0.65
SSB-201ENST00000260956 HMX1Q9NP08 348 aaPredicted RBP19.14■□□□□ 0.65
SSB-201ENST00000260956 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.14■□□□□ 0.65
SSB-201ENST00000260956 MCM3APO60318 1980 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 SYNGAP1Q96PV0 1343 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 N4BP1O75113 896 aaKnown RBP19.13■□□□□ 0.65
SSB-201ENST00000260956 LRRN2O75325 713 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 FTCDO95954 541 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 EDNRBP24530 442 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 FAM102BQ5T8I3 360 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 DNAAF5Q86Y56 855 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 ARHGEF19Q8IW93 802 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 CAGE1Q8TC20 777 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 LENG1Q96BZ8 264 aaPredicted RBP19.13■□□□□ 0.65
SSB-201ENST00000260956 KIFC3Q9BVG8 833 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 SLC9A2Q9UBY0 812 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 STXBP5LQ9Y2K9 1186 aa19.13■□□□□ 0.65
SSB-201ENST00000260956 H3BQF6 201 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 CES2O00748 559 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 PSAPP07602 524 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 GJB1P08034 283 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 SUPT20HL2P0C7V6 817 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 MYBL2P10244 700 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 ATP4AP20648 1035 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 CXCR5P32302 372 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 PRKCEQ02156 737 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 EEPD1Q7L9B9 569 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 DNERQ8NFT8 737 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 TPCN2Q8NHX9 752 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 MORC4Q8TE76 937 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 TMEM117Q9H0C3 514 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 RNF216Q9NWF9 866 aaPredicted RBP19.12■□□□□ 0.65
SSB-201ENST00000260956 ARHGAP28Q9P2N2 729 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 RNF14Q9UBS8 474 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 TCEAL9Q9UHQ7 104 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 COQ4Q9Y3A0 265 aa19.12■□□□□ 0.65
SSB-201ENST00000260956 IGKV6D-21A0A0A0MT36 114 aa19.11■□□□□ 0.65
SSB-201ENST00000260956 KRT13P13646 458 aa19.11■□□□□ 0.65
SSB-201ENST00000260956 ENPEPQ07075 957 aa19.11■□□□□ 0.65
SSB-201ENST00000260956 CBWD2Q8IUF1 395 aa19.11■□□□□ 0.65
SSB-201ENST00000260956 PDGFCQ9NRA1 345 aa19.11■□□□□ 0.65
SSB-201ENST00000260956 DKC1O60832 514 aaKnown RBP eCLIP19.11■□□□□ 0.65
SSB-201ENST00000260956 DGAT1O75907 488 aa19.11■□□□□ 0.65
SSB-201ENST00000260956 H2AFZP0C0S5 128 aa19.11■□□□□ 0.65
SSB-201ENST00000260956 CNGA1P29973 690 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms