RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TOMM70O94826 608 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 GJA9P57773 515 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 FAM189BP81408 668 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 ZACNQ401N2 412 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 DCAF8Q5TAQ9 597 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 TTC27Q6P3X3 843 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 KIAA1211Q6ZU35 1233 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 SESTD1Q86VW0 696 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 NOA1Q8NC60 698 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 FERMT2Q96AC1 680 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 NXF3Q9H4D5 531 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 PCNX3Q9H6A9 2034 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 ABHD10Q9NUJ1 306 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 FOXN3O00409 490 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 CLIC2O15247 247 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 DDX3YO15523 660 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 VTNP04004 478 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 ATXN1P54253 815 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 SLC47A2Q86VL8 602 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 SHCBP1Q8NEM2 672 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 ZFRQ96KR1 1074 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 NFKBIZQ9BYH8 718 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 FBXO40Q9UH90 709 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 MPHOSPH10O00566 681 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 CST5P28325 142 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 MCL1Q07820 350 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 TBC1D8BQ0IIM8 1120 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 HSF5Q4G112 596 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 ZNF572Q7Z3I7 529 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 EPS8L1Q8TE68 723 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 COG1Q8WTW3 980 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 PRPF31Q8WWY3 499 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 CCDC97Q96F63 343 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 PNKPQ96T60 521 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 BCO2Q9BYV7 579 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 ST7Q9NRC1 585 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 EIF3JO75822 258 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 PEX11BO96011 259 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 NFICP08651 508 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 CDC25BP30305 580 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 PTK2Q05397 1052 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 LRRC26Q2I0M4 334 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 RBBP8NLQ8NC74 664 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 KRT35Q92764 455 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 NT5C3BQ969T7 300 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 CD248Q9HCU0 757 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 TUBGCP4Q9UGJ1 667 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 TBX21Q9UL17 535 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 DDX39AO00148 427 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 MOSPD3O75425 235 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 ECM2O94769 699 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 ZRANB2O95218 330 aaKnown RBP eCLIP6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 INSRRP14616 1297 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 TPRNQ4KMQ1 711 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 COL13A1Q5TAT6 717 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 RSRC2Q7L4I2 434 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 CCDC186Q7Z3E2 898 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 RPAINQ86UA6 219 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 PNPLA1Q8N8W4 532 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 FAM20AQ96MK3 541 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 AIPL1Q9NZN9 384 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 CEP72Q9P209 647 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 OGDHLQ9ULD0 1010 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 ITIH6Q6UXX5 1313 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 CNGA1P29973 690 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 ME1P48163 572 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 CYP27A1Q02318 531 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 PPP2R3AQ06190 1150 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 DSC1Q08554 894 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 FAM187BQ17R55 369 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 FAM26DQ5JW98 314 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 TSHZ1Q6ZSZ6 1077 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 SV2AQ7L0J3 742 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 RRP36Q96EU6 259 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 TRPV6Q9H1D0 765 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 GABBR1Q9UBS5 961 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 OTOL1A6NHN0 477 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 LGALS16A8MUM7 142 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 FOXO6A8MYZ6 492 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 GABRDO14764 452 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 HSPA8P11142 646 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 ADCY1Q08828 1119 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 GALNT17Q6IS24 598 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 MB21D1Q8N884 522 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 DNAJB4Q9UDY4 337 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 CACNA1IQ9P0X4 2223 aa6.24□□□□□ -1.41
TOPBP1-201ENST00000260810 TEX15Q9BXT5 2789 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 CCDC88CQ9P219 2028 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 MFAP3LO75121 409 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 GJB3O75712 270 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 ENDOD1O94919 500 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 CALML3P27482 149 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 NLRP5P59047 1200 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 TPM4P67936 248 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 LPIN1Q14693 890 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 SAMD1Q6SPF0 538 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 METTL7BQ6UX53 244 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 PRUNE1Q86TP1 453 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 CERS3Q8IU89 383 aa6.23□□□□□ -1.41
TOPBP1-201ENST00000260810 SFTPA1Q8IWL2 248 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms