RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TRIM6Q9C030 488 aaPredicted RBP22.63■■□□□ 1.21
RTCA-201ENST00000260563 SEMA6BQ9H3T3 888 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 GRPEL1Q9HAV7 217 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 ANKFY1Q9P2R3 1169 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 ZMYM2Q9UBW7 1377 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 TRIM49BA6NDI0 452 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 ENPP3O14638 875 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 TOM1L1O75674 476 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 AMHP03971 560 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 BMP8BP34820 402 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 PMS1P54277 932 aaKnown RBP22.62■■□□□ 1.21
RTCA-201ENST00000260563 ZNF568Q3ZCX4 644 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 APBB1IPQ7Z5R6 666 aaPredicted RBP22.62■■□□□ 1.21
RTCA-201ENST00000260563 RTN4RL1Q86UN2 441 aaPredicted RBP22.62■■□□□ 1.21
RTCA-201ENST00000260563 RNPC3Q96LT9 517 aaKnown RBP22.62■■□□□ 1.21
RTCA-201ENST00000260563 TRAIPQ9BWF2 469 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 FAM105AQ9NUU6 356 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 RALGAPA2Q2PPJ7 1873 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 NPTXRO95502 500 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 SKIP12755 728 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 IBSPP21815 317 aaPredicted RBP22.62■■□□□ 1.21
RTCA-201ENST00000260563 MATR3P43243 847 aaKnown RBP eCLIP22.62■■□□□ 1.21
RTCA-201ENST00000260563 KNOP1Q1ED39 458 aaKnown RBP22.62■■□□□ 1.21
RTCA-201ENST00000260563 DCAF4L1Q3SXM0 396 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 SPATA1Q5VX52 437 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 EEF1DP3Q658K8 133 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 MPZL3Q6UWV2 235 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 CHRDL2Q6WN34 429 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.62■■□□□ 1.213e-6■■■■□ 21.7
RTCA-201ENST00000260563 EIF2AQ9BY44 585 aaKnown RBP22.62■■□□□ 1.21
RTCA-201ENST00000260563 KCTD10Q9H3F6 313 aa22.62■■□□□ 1.21
RTCA-201ENST00000260563 CXXC1Q9P0U4 656 aaPredicted RBP22.62■■□□□ 1.21
RTCA-201ENST00000260563 FNDC1Q4ZHG4 1894 aaPredicted RBP22.61■■□□□ 1.21
RTCA-201ENST00000260563 C9IYK1 514 aa22.61■■□□□ 1.21
RTCA-201ENST00000260563 PROZP22891 400 aa22.61■■□□□ 1.21
RTCA-201ENST00000260563 HOXD13P35453 343 aa22.61■■□□□ 1.21
RTCA-201ENST00000260563 SHHQ15465 462 aa22.61■■□□□ 1.21
RTCA-201ENST00000260563 UVSSAQ2YD98 709 aa22.61■■□□□ 1.21
RTCA-201ENST00000260563 UBXN11Q5T124 520 aa22.61■■□□□ 1.21
RTCA-201ENST00000260563 ANKRD40Q6AI12 368 aa22.61■■□□□ 1.21
RTCA-201ENST00000260563 TTI2Q6NXR4 508 aa22.61■■□□□ 1.21
RTCA-201ENST00000260563 TSG101Q99816 390 aa22.61■■□□□ 1.21
RTCA-201ENST00000260563 TCHPQ9BT92 498 aa22.61■■□□□ 1.21
RTCA-201ENST00000260563 RNF216Q9NWF9 866 aaPredicted RBP22.61■■□□□ 1.21
RTCA-201ENST00000260563 NFE2L3Q9Y4A8 694 aa22.61■■□□□ 1.21
RTCA-201ENST00000260563 A0A0U1RQF3 1178 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 TDRD15B5MCY1 1934 aaKnown RBP22.6■■□□□ 1.21
RTCA-201ENST00000260563 CLDN3O15551 220 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 MRE11P49959 708 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 TPM4P67936 248 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 DEFB103AP81534 67 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 LRRC63Q05C16 580 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 NOLC1Q14978 699 aaKnown RBP eCLIP22.6■■□□□ 1.21
RTCA-201ENST00000260563 TPD52L1Q16890 204 aaPredicted RBP22.6■■□□□ 1.21
RTCA-201ENST00000260563 SLC39A4Q6P5W5 647 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 FOXR2Q6PJQ5 311 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 SLC9A7Q96T83 725 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 GBP3Q9H0R5 595 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 CDT1Q9H211 546 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 PTPRHQ9HD43 1115 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 PCDHB2Q9Y5E7 798 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 SLC4A7Q9Y6M7 1214 aa22.6■■□□□ 1.21
RTCA-201ENST00000260563 TRIP11Q15643 1979 aa22.59■■□□□ 1.21
RTCA-201ENST00000260563 HARSP12081 509 aaKnown RBP22.59■■□□□ 1.21
RTCA-201ENST00000260563 ZCWPW2Q504Y3 356 aa22.59■■□□□ 1.21
RTCA-201ENST00000260563 RASIP1Q5U651 963 aa22.59■■□□□ 1.21
RTCA-201ENST00000260563 ZBTB33Q86T24 672 aa22.59■■□□□ 1.21
RTCA-201ENST00000260563 ECHDC2Q86YB7 292 aa22.59■■□□□ 1.21
RTCA-201ENST00000260563 ZBTB45Q96K62 511 aaPredicted RBP22.59■■□□□ 1.21
RTCA-201ENST00000260563 IKZF4Q9H2S9 585 aa22.59■■□□□ 1.21
RTCA-201ENST00000260563 LRFN2Q9ULH4 789 aa22.59■■□□□ 1.21
RTCA-201ENST00000260563 IPPQ9Y573 584 aa22.59■■□□□ 1.21
RTCA-201ENST00000260563 PDCD11Q14690 1871 aaKnown RBP22.59■■□□□ 1.21
RTCA-201ENST00000260563 TISP43B9A030 160 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 ANKRD63C9JTQ0 380 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 ABLIM1O14639 778 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 STAG3L1P0CL83 205 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 MCF2P10911 925 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 MCL1Q07820 350 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 SLFN12LQ6IEE8 588 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 HS2ST1Q7LGA3 356 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 NPAS4Q8IUM7 802 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 HACE1Q8IYU2 909 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 TDHQ8IZJ6 230 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 DUSP9Q99956 384 aaKnown RBP22.58■■□□□ 1.21
RTCA-201ENST00000260563 ELAC1Q9H777 363 aaKnown RBP22.58■■□□□ 1.21
RTCA-201ENST00000260563 TYW1Q9NV66 732 aaKnown RBP22.58■■□□□ 1.21
RTCA-201ENST00000260563 FANCLQ9NW38 375 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 TMEM161AQ9NX61 479 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 PCDHB7Q9Y5E2 793 aa22.58■■□□□ 1.21
RTCA-201ENST00000260563 ANK1P16157 1881 aa22.58■■□□□ 1.2
RTCA-201ENST00000260563 PDXKO00764 312 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 ZNF623O75123 536 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 PRPF38BQ5VTL8 546 aaKnown RBP22.57■■□□□ 1.2
RTCA-201ENST00000260563 RNF169Q8NCN4 708 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 POMGNT1Q8WZA1 660 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 PGBD4Q96DM1 585 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 MSTO1Q9BUK6 570 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 HSD3B7Q9H2F3 369 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 NXF3Q9H4D5 531 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms