RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 NOL4O94818 638 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 TRIM49P0CI25 452 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 TRIM49CP0CI26 452 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 CYP2C9P11712 490 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 PROZP22891 400 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 PON1P27169 355 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 CYP24A1Q07973 514 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 PRPF4BQ13523 1007 aaKnown RBP10.29□□□□□ -0.76
NIP7-202ENST00000254941 CBWD6Q4V339 395 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 CBWD3Q5JTY5 395 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 CBWD5Q5RIA9 395 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 CCSAPQ6IQ19 270 aaPredicted RBP10.29□□□□□ -0.76
NIP7-202ENST00000254941 DPY19L2P1Q6NXN4 242 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 GBP6Q6ZN66 633 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 USP37Q86T82 979 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 ZNF397Q8NF99 534 aaPredicted RBP10.29□□□□□ -0.76
NIP7-202ENST00000254941 NEK11Q8NG66 645 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 PLEKHO2Q8TD55 490 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 PPP1R13LQ8WUF5 828 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 PRIMPOLQ96LW4 560 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 FAM213AQ9BRX8 229 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 BEGAINQ9BUH8 593 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 MSTO1Q9BUK6 570 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 NAA15Q9BXJ9 866 aaKnown RBP10.29□□□□□ -0.76
NIP7-202ENST00000254941 PTPRHQ9HD43 1115 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 ANKFY1Q9P2R3 1169 aa10.29□□□□□ -0.76
NIP7-202ENST00000254941 P4HA2O15460 535 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 ARHGAP6O43182 974 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 FAM189A1O60320 539 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 N4BP1O75113 896 aaKnown RBP10.28□□□□□ -0.76
NIP7-202ENST00000254941 GPR32O75388 356 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 INHAP05111 366 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 ASGR1P07306 291 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 SLC9A1P19634 815 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 GRK4P32298 578 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 CLDN10P78369 228 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 MCL1Q07820 350 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 PPP3CAQ08209 521 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 KCNA10Q16322 511 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 AMHR2Q16671 573 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 NBPF20Q3BBV1 942 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 ATF7IP2Q5U623 682 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 CRELD2Q6UXH1 353 aaPredicted RBP10.28□□□□□ -0.76
NIP7-202ENST00000254941 RUFY4Q6ZNE9 571 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 SRGAP1Q7Z6B7 1085 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 PCSK9Q8NBP7 692 aaKnown RBP10.28□□□□□ -0.76
NIP7-202ENST00000254941 NLRP7Q8WX94 980 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 LSM14BQ9BX40 385 aaKnown RBP10.28□□□□□ -0.76
NIP7-202ENST00000254941 ADAMTS10Q9H324 1103 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 GCNT4Q9P109 453 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 CEP72Q9P209 647 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 CNTNAP2Q9UHC6 1331 aa10.28□□□□□ -0.76
NIP7-202ENST00000254941 B4GALT5O43286 388 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 CSDE1O75534 798 aaKnown RBP10.27□□□□□ -0.76
NIP7-202ENST00000254941 HSPA6P17066 643 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 HNRNPH3P31942 346 aaKnown RBP10.27□□□□□ -0.76
NIP7-202ENST00000254941 GTF2H1P32780 548 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 MATR3P43243 847 aaKnown RBP eCLIP10.27□□□□□ -0.76
NIP7-202ENST00000254941 ACOT2P49753 483 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 ZNF200P98182 395 aaPredicted RBP10.27□□□□□ -0.76
NIP7-202ENST00000254941 MYL7Q01449 175 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 MEA1Q16626 185 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 KIZQ2M2Z5 673 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 TSR1Q2NL82 804 aaKnown RBP10.27□□□□□ -0.76
NIP7-202ENST00000254941 MPZL3Q6UWV2 235 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 SESTD1Q86VW0 696 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 DNAJB3Q8WWF6 145 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 BAP1Q92560 729 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 CCDC127Q96BQ5 260 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 SCLT1Q96NL6 688 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 PPP1R16BQ96T49 567 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 TCHPQ9BT92 498 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 FAM49AQ9H0Q0 323 aaPredicted RBP10.27□□□□□ -0.76
NIP7-202ENST00000254941 GANQ9H2C0 597 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 HMX1Q9NP08 348 aaPredicted RBP10.27□□□□□ -0.76
NIP7-202ENST00000254941 GTF2IRD1Q9UHL9 959 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 TSKSQ9UJT2 592 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 FBXL5Q9UKA1 691 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 PLAGL2Q9UPG8 496 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 TNFSF13BQ9Y275 285 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 FARP1Q9Y4F1 1045 aaPredicted RBP10.27□□□□□ -0.76
NIP7-202ENST00000254941 TRIM17Q9Y577 477 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 PTCH2Q9Y6C5 1203 aa10.27□□□□□ -0.76
NIP7-202ENST00000254941 LRRIQ3A6PVS8 624 aaPredicted RBP10.27□□□□□ -0.77
NIP7-202ENST00000254941 OGTO15294 1046 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 UCHL3P15374 230 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 GCLMP48507 274 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 POLR2FP61218 127 aaKnown RBP10.27□□□□□ -0.77
NIP7-202ENST00000254941 CETN1Q12798 172 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 NOLC1Q14978 699 aaKnown RBP eCLIP10.27□□□□□ -0.77
NIP7-202ENST00000254941 PSMD6Q15008 389 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 PCBP1Q15365 356 aaKnown RBP eCLIP10.27□□□□□ -0.77
NIP7-202ENST00000254941 KLHDC7AQ5VTJ3 777 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 TAF2Q6P1X5 1199 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 TRIM65Q6PJ69 517 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 WDR59Q6PJI9 974 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 CACNA2D4Q7Z3S7 1137 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 RNF180Q86T96 592 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 TMTC1Q8IUR5 882 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms