RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 SLC13A5Q86YT5 568 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 ZBTB8OSQ8IWT0 167 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PPM1NQ8N819 430 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MICAL3Q7RTP6 2002 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 ENO4A6NNW6 628 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 DIAPH2O60879 1101 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 ESRRAP11474 423 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 COG2Q14746 738 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 LONRF1Q17RB8 773 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 FIGNQ5HY92 759 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MEI1Q5TIA1 1274 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 AEBP2Q6ZN18 517 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 CENPUQ71F23 418 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 KCTD6Q8NC69 237 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 FBXL13Q8NEE6 735 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 ATP6V0A1Q93050 837 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 NRBP2Q9NSY0 501 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 USH1CQ9Y6N9 552 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MCF2LO15068 1137 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MAP3K7O43318 606 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SGPL1O95470 568 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 GGPS1O95749 300 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 CCDC14Q49A88 953 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SYCP2LQ5T4T6 812 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 CBWD1Q9BRT8 395 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 TRIM4Q9C037 500 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 TMEM117Q9H0C3 514 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 IKZF4Q9H2S9 585 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MAGED2Q9UNF1 606 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 ARL2BPQ9Y2Y0 163 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 USP15Q9Y4E8 981 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 TTLL3Q9Y4R7 772 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 CFAP69A5D8W1 941 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 TMEM119Q4V9L6 283 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 NLGN1Q8N2Q7 840 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PPP4R1Q8TF05 950 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 FAM81BQ96LP2 452 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 NOD2Q9HC29 1040 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SUFUQ9UMX1 484 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 DDX3XO00571 662 aaKnown RBP eCLIP4.91□□□□□ -1.627e-16■■■■■ 39.8
VPS13C-201ENST00000249837 ARSEP51690 589 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 SKOR1P84550 965 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 AADACL2Q6P093 401 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 GADL1Q6ZQY3 521 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.91□□□□□ -1.626e-8■□□□□ 8.4
VPS13C-201ENST00000249837 ACER1Q8TDN7 264 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 NLRP4Q96MN2 994 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 WDR64B1ANS9 1081 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 ANXA13P27216 316 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 CCND2P30279 289 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 YWHAEP62258 255 aaKnown RBP4.91□□□□□ -1.62
VPS13C-201ENST00000249837 MAPK7Q13164 816 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 TMEM270Q6UE05 265 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 LDHDQ86WU2 507 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 ZFPM1Q8IX07 1006 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 KLF6Q99612 283 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-201ENST00000249837 NFAT5O94916 1531 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 TMEM120BA0PK00 339 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 F8VZ95 297 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 SMIM24O75264 130 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 MARK3P27448 753 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 ERFP50548 548 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 DRP2Q13474 957 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 C2CD6Q53TS8 623 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 RASIP1Q5U651 963 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 TRMT10CQ7L0Y3 403 aaKnown RBP4.91□□□□□ -1.62
VPS13C-201ENST00000249837 SPATA24Q86W54 205 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 SEPT12Q8IYM1 358 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 SYT2Q8N9I0 419 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-201ENST00000249837 SGSM3Q96HU1 749 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 MED10Q9BTT4 135 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 NPHS2Q9NP85 383 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 SLURP2P0DP57 97 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 P3H1Q32P28 736 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 DTX3LQ8TDB6 740 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 ZNF526Q8TF50 670 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-201ENST00000249837 BAP1Q92560 729 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 PPFIA2O75334 1257 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 UBOX5O94941 541 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 TJP3O95049 919 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 SCP2P22307 547 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 GNA15P30679 374 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 ARFIP2P53365 341 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 ITGA8P53708 1063 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 KCNMA1Q12791 1236 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 APTXQ7Z2E3 356 aaKnown RBP4.91□□□□□ -1.62
VPS13C-201ENST00000249837 ZC3H18Q86VM9 953 aaKnown RBP4.91□□□□□ -1.62
VPS13C-201ENST00000249837 PDIK1LQ8N165 341 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 FBXO41Q8TF61 875 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 CALR3Q96L12 384 aaKnown RBP4.91□□□□□ -1.62
VPS13C-201ENST00000249837 MMTAG2Q9BU76 263 aaKnown RBP4.91□□□□□ -1.62
VPS13C-201ENST00000249837 RIOX1Q9H6W3 641 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 ECE2O60344 883 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 AGTP01019 485 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 ARP10275 920 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 NPEPPSP55786 919 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 POLE2P56282 527 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 SWSAP1Q6NVH7 229 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 TMEM143Q96AN5 459 aa4.91□□□□□ -1.62
VPS13C-201ENST00000249837 ARHGEF26Q96DR7 871 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms