RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 A0A0U1RQJ8 604 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 EIF3CLB5ME19 914 aaKnown RBP16.52■□□□□ 0.23
HDHD3-201ENST00000238379 FAM189A1O60320 539 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 VTNP04004 478 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 IQCF3P0C7M6 154 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 PROZP22891 400 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 GTF2H1P32780 548 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 PHKA2P46019 1235 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 CETN1Q12798 172 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 HSP90AA2PQ14568 343 aaPredicted RBP16.52■□□□□ 0.23
HDHD3-201ENST00000238379 MFSD10Q14728 455 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 KIF22Q14807 665 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 FSCN1Q16658 493 aaKnown RBP16.52■□□□□ 0.23
HDHD3-201ENST00000238379 ZBTB41Q5SVQ8 909 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 GPIHBP1Q8IV16 184 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 ATRIPQ8WXE1 791 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 CCDC42Q96M95 316 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 SPAG5Q96R06 1193 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 EIF3CQ99613 913 aaKnown RBP16.52■□□□□ 0.23
HDHD3-201ENST00000238379 FDXACB1Q9BRP7 624 aaPredicted RBP16.52■□□□□ 0.23
HDHD3-201ENST00000238379 TMEM8AQ9HCN3 771 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 PTPRHQ9HD43 1115 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 TOPORSQ9NS56 1045 aaPredicted RBP16.52■□□□□ 0.23
HDHD3-201ENST00000238379 RNF186Q9NXI6 227 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 APEX2Q9UBZ4 518 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 COQ4Q9Y3A0 265 aa16.52■□□□□ 0.23
HDHD3-201ENST00000238379 SSU72P8A0A1W2PR75 194 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 KIF2AO00139 706 aaPredicted RBP16.51■□□□□ 0.23
HDHD3-201ENST00000238379 LRRN2O75325 713 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 TRPA1O75762 1119 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 SERPING1P05155 500 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 MYL3P08590 195 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 MAP2K2P36507 400 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 EIF4A3P38919 411 aaKnown RBP16.51■□□□□ 0.23
HDHD3-201ENST00000238379 MATR3P43243 847 aaKnown RBP eCLIP16.51■□□□□ 0.23
HDHD3-201ENST00000238379 PSEN2P49810 448 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 WNT7BP56706 349 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 ADAM17P78536 824 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 MCL1Q07820 350 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
HDHD3-201ENST00000238379 FAM187BQ17R55 369 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 ASTE1Q2TB18 679 aaPredicted RBP16.51■□□□□ 0.23
HDHD3-201ENST00000238379 SLC9C1Q4G0N8 1177 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 KRT39Q6A163 491 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 PHLDB3Q6NSJ2 640 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 NFRKBQ6P4R8 1299 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 TSHZ1Q6ZSZ6 1077 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 IRF2BP2Q7Z5L9 587 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 DAAM1Q9Y4D1 1078 aa16.51■□□□□ 0.23
HDHD3-201ENST00000238379 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 MBLAC1A4D2B0 266 aaPredicted RBP16.5■□□□□ 0.23
HDHD3-201ENST00000238379 B4GALT5O43286 388 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 DLATP10515 647 aaKnown RBP16.5■□□□□ 0.23
HDHD3-201ENST00000238379 GJA9P57773 515 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 CHMP4BP1P59074 171 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 ETF1P62495 437 aaKnown RBP16.5■□□□□ 0.23
HDHD3-201ENST00000238379 PURAQ00577 322 aaKnown RBP16.5■□□□□ 0.23
HDHD3-201ENST00000238379 MAP2K1Q02750 393 aaPredicted RBP16.5■□□□□ 0.23
HDHD3-201ENST00000238379 TRIM32Q13049 653 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 PRPF4BQ13523 1007 aaKnown RBP16.5■□□□□ 0.23
HDHD3-201ENST00000238379 HIC1Q14526 733 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 AMHR2Q16671 573 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 SV2AQ7L0J3 742 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 PPP1R13LQ8WUF5 828 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 ZNF516Q92618 1163 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 MAP7D2Q96T17 732 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 TCHPQ9BT92 498 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 PRMT7Q9NVM4 692 aaPredicted RBP16.5■□□□□ 0.23
HDHD3-201ENST00000238379 DNAJC12Q9UKB3 198 aa16.5■□□□□ 0.23
HDHD3-201ENST00000238379 MYADML2A6NDP7 307 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 ZNF263O14978 683 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 LCA5LO95447 670 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 TUBB4AP04350 444 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 VEGFBP49765 207 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 GPC3P51654 580 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 KRT83P78385 493 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 CACNB2Q08289 660 aaPredicted RBP16.49■□□□□ 0.23
HDHD3-201ENST00000238379 ATF7IP2Q5U623 682 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 C15orf39Q6ZRI6 1047 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 ZBTB33Q86T24 672 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 PPP1R16BQ96T49 567 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 STK33Q9BYT3 514 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 PDE11AQ9HCR9 933 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 LZTFL1Q9NQ48 299 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 RBAKQ9NYW8 714 aaPredicted RBP16.49■□□□□ 0.23
HDHD3-201ENST00000238379 TNFSF13BQ9Y275 285 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 CASP8AP2Q9UKL3 1982 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 SEPT4O43236 478 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 CSDE1O75534 798 aaKnown RBP16.49■□□□□ 0.23
HDHD3-201ENST00000238379 HARSP12081 509 aaKnown RBP16.49■□□□□ 0.23
HDHD3-201ENST00000238379 RFX1P22670 979 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 ARHGAP25P42331 645 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 KIF11P52732 1056 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 NKX3-2P78367 333 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 ARID5AQ03989 594 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 ASIC2Q16515 512 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 SEZ6Q53EL9 994 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 MPZL3Q6UWV2 235 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 SEMA4DQ92854 862 aa16.49■□□□□ 0.23
HDHD3-201ENST00000238379 UPF3AQ9H1J1 476 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms