RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 TSHZ1Q6ZSZ6 1077 aa20.23■□□□□ 0.83
SNX17-201ENST00000233575 CNGA4Q8IV77 575 aa20.23■□□□□ 0.83
SNX17-201ENST00000233575 TCHPQ9BT92 498 aa20.23■□□□□ 0.83
SNX17-201ENST00000233575 PTPRHQ9HD43 1115 aa20.23■□□□□ 0.83
SNX17-201ENST00000233575 HMX1Q9NP08 348 aaPredicted RBP20.23■□□□□ 0.83
SNX17-201ENST00000233575 TOPORSQ9NS56 1045 aaPredicted RBP20.23■□□□□ 0.83
SNX17-201ENST00000233575 ABHD10Q9NUJ1 306 aa20.23■□□□□ 0.83
SNX17-201ENST00000233575 GTF2IRD1Q9UHL9 959 aa20.23■□□□□ 0.83
SNX17-201ENST00000233575 FRMPD3Q5JV73 1810 aa20.23■□□□□ 0.83
SNX17-201ENST00000233575 FAM189A1O60320 539 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 TPM1P09493 284 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 PROZP22891 400 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 GCLMP48507 274 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 FAM47CQ5HY64 1035 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 FIGNQ5HY92 759 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 ATF7IP2Q5U623 682 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 PARD3BQ8TEW8 1205 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 CPB2Q96IY4 423 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 OSMRQ99650 979 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 NUP58Q9BVL2 599 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 PRMT7Q9NVM4 692 aaPredicted RBP20.22■□□□□ 0.83
SNX17-201ENST00000233575 GCNT4Q9P109 453 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 LUC7L2Q9Y383 392 aaKnown RBP20.22■□□□□ 0.83
SNX17-201ENST00000233575 LRRIQ3A6PVS8 624 aaPredicted RBP20.22■□□□□ 0.83
SNX17-201ENST00000233575 LRRN2O75325 713 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 MYCP01106 439 aaPredicted RBP20.22■□□□□ 0.83
SNX17-201ENST00000233575 MSNP26038 577 aaKnown RBP20.22■□□□□ 0.83
SNX17-201ENST00000233575 PON1P27169 355 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 TNFSF9P41273 254 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 EXOC3L4Q17RC7 722 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 ZNF410Q86VK4 478 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 NEK11Q8NG66 645 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 PANX2Q96RD6 677 aa20.22■□□□□ 0.83
SNX17-201ENST00000233575 BAG1Q99933 345 aaPredicted RBP20.22■□□□□ 0.83
SNX17-201ENST00000233575 ZNF233A6NK53 670 aa20.21■□□□□ 0.83
SNX17-201ENST00000233575 FAM187BQ17R55 369 aa20.21■□□□□ 0.83
SNX17-201ENST00000233575 TMEM132AQ24JP5 1023 aa20.21■□□□□ 0.83
SNX17-201ENST00000233575 GPIHBP1Q8IV16 184 aa20.21■□□□□ 0.83
SNX17-201ENST00000233575 KIAA1524Q8TCG1 905 aa20.21■□□□□ 0.83
SNX17-201ENST00000233575 WNT8BQ93098 351 aa20.21■□□□□ 0.83
SNX17-201ENST00000233575 CNTNAP2Q9UHC6 1331 aa20.21■□□□□ 0.83
SNX17-201ENST00000233575 DLATP10515 647 aaKnown RBP20.2■□□□□ 0.83
SNX17-201ENST00000233575 GNAT1P11488 350 aa20.2■□□□□ 0.83
SNX17-201ENST00000233575 ARF4P18085 180 aaPredicted RBP20.2■□□□□ 0.83
SNX17-201ENST00000233575 MCCD1P59942 119 aaPredicted RBP20.2■□□□□ 0.83
SNX17-201ENST00000233575 MYL7Q01449 175 aa20.2■□□□□ 0.83
SNX17-201ENST00000233575 MCL1Q07820 350 aa20.2■□□□□ 0.83
SNX17-201ENST00000233575 MPZL3Q6UWV2 235 aa20.2■□□□□ 0.83
SNX17-201ENST00000233575 GBP6Q6ZN66 633 aa20.2■□□□□ 0.83
SNX17-201ENST00000233575 RNF180Q86T96 592 aa20.2■□□□□ 0.83
SNX17-201ENST00000233575 CEP120Q8N960 986 aa20.2■□□□□ 0.83
SNX17-201ENST00000233575 TMEM40Q8WWA1 233 aa20.2■□□□□ 0.83
SNX17-201ENST00000233575 GANQ9H2C0 597 aa20.2■□□□□ 0.83
SNX17-201ENST00000233575 NLRC4Q9NPP4 1024 aa20.2■□□□□ 0.83
SNX17-201ENST00000233575 TNFSF13BQ9Y275 285 aa20.2■□□□□ 0.83
SNX17-201ENST00000233575 TSPAN1O60635 241 aa20.2■□□□□ 0.82
SNX17-201ENST00000233575 ACLYP53396 1101 aa20.2■□□□□ 0.82
SNX17-201ENST00000233575 NOLC1Q14978 699 aaKnown RBP eCLIP20.2■□□□□ 0.82
SNX17-201ENST00000233575 ZNF568Q3ZCX4 644 aa20.2■□□□□ 0.82
SNX17-201ENST00000233575 LMBRD2Q68DH5 695 aaPredicted RBP20.2■□□□□ 0.82
SNX17-201ENST00000233575 PCSK9Q8NBP7 692 aaKnown RBP20.2■□□□□ 0.82
SNX17-201ENST00000233575 BAP1Q92560 729 aa20.2■□□□□ 0.82
SNX17-201ENST00000233575 TMEM117Q9H0C3 514 aa20.2■□□□□ 0.82
SNX17-201ENST00000233575 PDE11AQ9HCR9 933 aa20.2■□□□□ 0.82
SNX17-201ENST00000233575 SIX2Q9NPC8 291 aa20.2■□□□□ 0.82
SNX17-201ENST00000233575 PTPN22Q9Y2R2 807 aa20.2■□□□□ 0.82
SNX17-201ENST00000233575 A0A1W2PQJ5 194 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 GTPBP10A4D1E9 387 aaKnown RBP20.19■□□□□ 0.82
SNX17-201ENST00000233575 KIAA0391O15091 583 aaKnown RBP20.19■□□□□ 0.82
SNX17-201ENST00000233575 POLR2FP61218 127 aaKnown RBP20.19■□□□□ 0.82
SNX17-201ENST00000233575 E4F1Q66K89 784 aaPredicted RBP20.19■□□□□ 0.82
SNX17-201ENST00000233575 SRGAP1Q7Z6B7 1085 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 DNAJC7Q99615 494 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 CDT1Q9H211 546 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 PDZD7Q9H5P4 517 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 KIAA1586Q9HCI6 787 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 RBAKQ9NYW8 714 aaPredicted RBP20.19■□□□□ 0.82
SNX17-201ENST00000233575 AJAP1Q9UKB5 411 aaPredicted RBP20.19■□□□□ 0.82
SNX17-201ENST00000233575 PTPRJQ12913 1337 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 ZBED6P86452 979 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 GJB7Q6PEY0 223 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 TRIM65Q6PJ69 517 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 WDR59Q6PJI9 974 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 DNAJC5GQ8N7S2 189 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 CCDC112Q8NEF3 446 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 OR8K1Q8NGG5 319 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 TMC2Q8TDI7 906 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 CCDC51Q96ER9 411 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 PRIMPOLQ96LW4 560 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 GCOM2Q9BZD3 368 aaPredicted RBP20.19■□□□□ 0.82
SNX17-201ENST00000233575 UNC93B1Q9H1C4 597 aa20.19■□□□□ 0.82
SNX17-201ENST00000233575 SOWAHDA6NJG2 315 aa20.18■□□□□ 0.82
SNX17-201ENST00000233575 LDHAP00338 332 aaKnown RBP20.18■□□□□ 0.82
SNX17-201ENST00000233575 OSTNP61366 133 aa20.18■□□□□ 0.82
SNX17-201ENST00000233575 MTF1Q14872 753 aa20.18■□□□□ 0.82
SNX17-201ENST00000233575 KLHDC7AQ5VTJ3 777 aa20.18■□□□□ 0.82
SNX17-201ENST00000233575 TMEM192Q8IY95 271 aa20.18■□□□□ 0.82
SNX17-201ENST00000233575 THNSL1Q8IYQ7 743 aa20.18■□□□□ 0.82
SNX17-201ENST00000233575 ZNF516Q92618 1163 aa20.18■□□□□ 0.82
SNX17-201ENST00000233575 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms