RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 SYCE2Q6PIF2 218 aa15.69■□□□□ 0.1
GPN3-201ENST00000228827 TMEM184AQ6ZMB5 413 aa15.69■□□□□ 0.1
GPN3-201ENST00000228827 RABGGTAQ92696 567 aa15.69■□□□□ 0.1
GPN3-201ENST00000228827 CASP10Q92851 521 aa15.69■□□□□ 0.1
GPN3-201ENST00000228827 CDK5RAP3Q96JB5 506 aa15.69■□□□□ 0.1
GPN3-201ENST00000228827 RPS6KC1Q96S38 1066 aa15.69■□□□□ 0.1
GPN3-201ENST00000228827 POP1Q99575 1024 aaKnown RBP15.69■□□□□ 0.1
GPN3-201ENST00000228827 MARCH5Q9NX47 278 aa15.69■□□□□ 0.1
GPN3-201ENST00000228827 BDP1A6H8Y1 2624 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 C2CD2LO14523 706 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 NPTX2P47972 431 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 EFNA5P52803 228 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 DSC1Q08554 894 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 NT5DC1Q5TFE4 455 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 TAS1R1Q7RTX1 841 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 BRAPQ7Z569 592 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 CABP7Q86V35 215 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 DAW1Q8N136 415 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 GSTCDQ8NEC7 633 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 ADPGKQ9BRR6 497 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 S1PR5Q9H228 398 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 CACNG4Q9UBN1 327 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 CDH22Q9UJ99 828 aa15.68■□□□□ 0.1
GPN3-201ENST00000228827 SFI1A8K8P3 1242 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 NR1I2O75469 434 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 EPCAMP16422 314 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 HYIQ5T013 277 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 ATF7IP2Q5U623 682 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 ARL6IP4Q66PJ3 421 aaKnown RBP15.67■□□□□ 0.1
GPN3-201ENST00000228827 C1orf186Q6ZWK4 172 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 RPGRIP1Q96KN7 1286 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 DRC1Q96MC2 740 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 CXCL16Q9H2A7 254 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 RAPGEFL1Q9UHV5 662 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 GDAQ9Y2T3 454 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 IRAK3Q9Y616 596 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 BRWD1Q9NSI6 2320 aa15.67■□□□□ 0.1
GPN3-201ENST00000228827 K7ERI5 159 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 RECQL4O94761 1208 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 HOXB8P17481 243 aaPredicted RBP15.66■□□□□ 0.1
GPN3-201ENST00000228827 COL9A1P20849 921 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 GRIK3Q13003 919 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 MAPK7Q13164 816 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 DMP1Q13316 513 aaPredicted RBP15.66■□□□□ 0.1
GPN3-201ENST00000228827 GIT2Q14161 759 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 SF3A1Q15459 793 aaKnown RBP15.66■□□□□ 0.1
GPN3-201ENST00000228827 TMEM31Q5JXX7 168 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 RARS2Q5T160 578 aaKnown RBP15.66■□□□□ 0.1
GPN3-201ENST00000228827 KANK3Q6NY19 840 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 POTEHQ6S545 545 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 C12orf76Q8N812 135 aaPredicted RBP15.66■□□□□ 0.1
GPN3-201ENST00000228827 SUSD6Q92537 303 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 HERC2P3Q9BVR0 1158 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 COLEC11Q9BWP8 271 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 PHF7Q9BWX1 381 aaPredicted RBP15.66■□□□□ 0.1
GPN3-201ENST00000228827 EMILIN2Q9BXX0 1053 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 NT5C3AQ9H0P0 336 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 KMT5AQ9NQR1 393 aa15.66■□□□□ 0.1
GPN3-201ENST00000228827 MRPL17Q9NRX2 175 aaKnown RBP15.66■□□□□ 0.1
GPN3-201ENST00000228827 NPHP3-ACAD11A0A0J9YXS1 232 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 SLC16A4O15374 487 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 DCXO43602 365 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 SOD2P04179 222 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 URODP06132 367 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 WEE2P0C1S8 567 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 PLA2G4BP0C869 781 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 ALADP13716 330 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 PDCP20941 246 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 SP100P23497 879 aaPredicted RBP15.65■□□□□ 0.1
GPN3-201ENST00000228827 KLRC2P26717 231 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 GRIN1Q05586 938 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 CBX2Q14781 532 aaPredicted RBP15.65■□□□□ 0.1
GPN3-201ENST00000228827 DCAF4L1Q3SXM0 396 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 TPRNQ4KMQ1 711 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 TMEM119Q4V9L6 283 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 RNF135Q8IUD6 432 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 SYT2Q8N9I0 419 aaPredicted RBP15.65■□□□□ 0.1
GPN3-201ENST00000228827 B3GALT6Q96L58 329 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 KLHL5Q96PQ7 755 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 LRFN3Q9BTN0 628 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 C11orf16Q9NQ32 467 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 STK39Q9UEW8 545 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 MUTYHQ9UIF7 546 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 PHLPP2Q6ZVD8 1323 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 CASTOR2A6NHX0 329 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 PTGESO14684 152 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 CNPP09543 421 aaKnown RBP15.65■□□□□ 0.1
GPN3-201ENST00000228827 SYT1P21579 422 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 GUCY2CP25092 1073 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 UBA7P41226 1012 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 SLC12A3P55017 1021 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 DHX8Q14562 1220 aaKnown RBP15.65■□□□□ 0.1
GPN3-201ENST00000228827 TAS1R3Q7RTX0 852 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 SLC22A17Q8WUG5 538 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 PAAF1Q9BRP4 392 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 CLIC4Q9Y696 253 aa15.65■□□□□ 0.1
GPN3-201ENST00000228827 ZMYM2Q9UBW7 1377 aa15.64■□□□□ 0.09
GPN3-201ENST00000228827 SPDYE4A6NLX3 237 aa15.64■□□□□ 0.09
GPN3-201ENST00000228827 LOC730098B7Z3J9 87 aa15.64■□□□□ 0.09
GPN3-201ENST00000228827 K7ELQ4 463 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms