RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 NENFQ9UMX5 172 aa18.83■□□□□ 0.6
VRK1-201ENST00000216639 HYOU1Q9Y4L1 999 aa18.83■□□□□ 0.6
VRK1-201ENST00000216639 PLXNA1Q9UIW2 1896 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 SRCAPQ6ZRS2 3230 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 DDX3XO00571 662 aaKnown RBP eCLIP18.82■□□□□ 0.6
VRK1-201ENST00000216639 ZC3H11AO75152 810 aaKnown RBP eCLIP18.82■□□□□ 0.6
VRK1-201ENST00000216639 LRRN2O75325 713 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 H2AFXP16104 143 aaPredicted RBP18.82■□□□□ 0.6
VRK1-201ENST00000216639 ARHGAP1Q07960 439 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 LAMTOR4Q0VGL1 99 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 FBXO38Q6PIJ6 1188 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 MAMDC4Q6UXC1 1216 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 PLEKHH3Q7Z736 793 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 PPM1KQ8N3J5 372 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 CAGE1Q8TC20 777 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 U2AF1L4Q8WU68 220 aaKnown RBP18.82■□□□□ 0.6
VRK1-201ENST00000216639 POP1Q99575 1024 aaKnown RBP18.82■□□□□ 0.6
VRK1-201ENST00000216639 TARS2Q9BW92 718 aaKnown RBP18.82■□□□□ 0.6
VRK1-201ENST00000216639 PACSIN1Q9BY11 444 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 MRPL4Q9BYD3 311 aaKnown RBP18.82■□□□□ 0.6
VRK1-201ENST00000216639 PCDHGC5Q9Y5F6 944 aa18.82■□□□□ 0.6
VRK1-201ENST00000216639 ZBTB42B2RXF5 422 aa18.81■□□□□ 0.6
VRK1-201ENST00000216639 CLDN10P78369 228 aa18.81■□□□□ 0.6
VRK1-201ENST00000216639 GRB14Q14449 540 aa18.81■□□□□ 0.6
VRK1-201ENST00000216639 CDCA2Q69YH5 1023 aaPredicted RBP18.81■□□□□ 0.6
VRK1-201ENST00000216639 SV2AQ7L0J3 742 aa18.81■□□□□ 0.6
VRK1-201ENST00000216639 PPTC7Q8NI37 304 aa18.81■□□□□ 0.6
VRK1-201ENST00000216639 SLC30A5Q8TAD4 765 aa18.81■□□□□ 0.6
VRK1-201ENST00000216639 EMID1Q96A84 441 aaPredicted RBP18.81■□□□□ 0.6
VRK1-201ENST00000216639 ANKFY1Q9P2R3 1169 aa18.81■□□□□ 0.6
VRK1-201ENST00000216639 MCM3APO60318 1980 aa18.81■□□□□ 0.6
VRK1-201ENST00000216639 A0A0A6YYK5 440 aaPredicted RBP18.8■□□□□ 0.6
VRK1-201ENST00000216639 A0A0B4J269 797 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 ASAP2O43150 1006 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 SRGAP2O75044 1071 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 PALMO75781 387 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 TNNI1P19237 187 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 DRP2Q13474 957 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 MAPK6Q16659 721 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 ZNF484Q5JVG2 852 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 ENOSF1Q7L5Y1 443 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 GLYCTKQ8IVS8 523 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 TAS1R2Q8TE23 839 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 LMBR1Q8WVP7 490 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 AGPAT1Q99943 283 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 RBAKQ9NYW8 714 aaPredicted RBP18.8■□□□□ 0.6
VRK1-201ENST00000216639 SUCLA2Q9P2R7 463 aaPredicted RBP18.8■□□□□ 0.6
VRK1-201ENST00000216639 CLDN3O15551 220 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 SRGAP2CP0DJJ0 459 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 NOP2P46087 812 aaKnown RBP18.8■□□□□ 0.6
VRK1-201ENST00000216639 NLRP11P59045 1033 aaKnown RBP18.8■□□□□ 0.6
VRK1-201ENST00000216639 LRRC71Q8N4P6 559 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 RNF149Q8NC42 400 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 LNX1Q8TBB1 728 aaPredicted RBP18.8■□□□□ 0.6
VRK1-201ENST00000216639 SEMA4DQ92854 862 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 CAPZA3Q96KX2 299 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 PTPN18Q99952 460 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 SYT11Q9BT88 431 aa18.8■□□□□ 0.6
VRK1-201ENST00000216639 TOPORSQ9NS56 1045 aaPredicted RBP18.8■□□□□ 0.6
VRK1-201ENST00000216639 SEPT11Q9NVA2 429 aaKnown RBP18.8■□□□□ 0.6
VRK1-201ENST00000216639 SLC15A5A6NIM6 579 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 TOM1L1O75674 476 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 LGALS2P05162 132 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 TUBBP07437 444 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 USP8P40818 1118 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 ACOT2P49753 483 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 HUNKP57058 714 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 WDR44Q5JSH3 913 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 RHPN2Q8IUC4 686 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 MAML3Q96JK9 1138 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 OSBPL9Q96SU4 736 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 CCDC113Q9H0I3 377 aa18.79■□□□□ 0.6
VRK1-201ENST00000216639 ADGRA2Q96PE1 1338 aa18.78■□□□□ 0.6
VRK1-201ENST00000216639 PRKCBP05771 671 aa18.78■□□□□ 0.6
VRK1-201ENST00000216639 TMEM253P0C7T8 217 aa18.78■□□□□ 0.6
VRK1-201ENST00000216639 MKRN4PQ13434 485 aaPredicted RBP18.78■□□□□ 0.6
VRK1-201ENST00000216639 TMEM63BQ5T3F8 832 aa18.78■□□□□ 0.6
VRK1-201ENST00000216639 EFCAB12Q6NXP0 572 aa18.78■□□□□ 0.6
VRK1-201ENST00000216639 C15orf39Q6ZRI6 1047 aa18.78■□□□□ 0.6
VRK1-201ENST00000216639 FAM71AQ8IYT1 594 aa18.78■□□□□ 0.6
VRK1-201ENST00000216639 MSL3Q8N5Y2 521 aaKnown RBP18.78■□□□□ 0.6
VRK1-201ENST00000216639 SHC3Q92529 594 aa18.78■□□□□ 0.6
VRK1-201ENST00000216639 ZBTB45Q96K62 511 aaPredicted RBP18.78■□□□□ 0.6
VRK1-201ENST00000216639 TCHPQ9BT92 498 aa18.78■□□□□ 0.6
VRK1-201ENST00000216639 ABHD16BQ9H3Z7 469 aa18.78■□□□□ 0.6
VRK1-201ENST00000216639 C1orf112Q9NSG2 853 aa18.78■□□□□ 0.6
VRK1-201ENST00000216639 MAGEB2O15479 319 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 MSCO60682 206 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 PPFIA4O75335 1185 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 SNAI1O95863 264 aaPredicted RBP18.77■□□□□ 0.6
VRK1-201ENST00000216639 TFRCP02786 760 aaKnown RBP18.77■□□□□ 0.6
VRK1-201ENST00000216639 ADCYAP1R1P41586 468 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 GCNT1Q02742 428 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 ZACNQ401N2 412 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 CCDC181Q5TID7 509 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 CST9Q5W186 159 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 TMCO3Q6UWJ1 677 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 CRELD2Q6UXH1 353 aaPredicted RBP18.77■□□□□ 0.6
VRK1-201ENST00000216639 METTL13Q8N6R0 699 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 HELQQ8TDG4 1101 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms