RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 VAMP7P51809 220 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 CLDN10P78369 228 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 CYP24A1Q07973 514 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 TRIM14Q14142 442 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 NOLC1Q14978 699 aaKnown RBP eCLIP17.12■□□□□ 0.33
TMED1-201ENST00000214869 SNX17Q15036 470 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 PTGISQ16647 500 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 TRIM71Q2Q1W2 868 aaKnown RBP17.12■□□□□ 0.33
TMED1-201ENST00000214869 FAM26DQ5JW98 314 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 C1orf220Q5T0J3 134 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 USP37Q86T82 979 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 PARD3BQ8TEW8 1205 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 VTI1AQ96AJ9 217 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 SAAL1Q96ER3 474 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 PDZD7Q9H5P4 517 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.12■□□□□ 0.33
TMED1-201ENST00000214869 TRPV2Q9Y5S1 764 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 DNAH12Q6ZR08 3092 aa17.12■□□□□ 0.33
TMED1-201ENST00000214869 CITO14578 2027 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 GOLGA8IPA6NC78 632 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 GOLGA8JA6NMD2 632 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 ARVCFO00192 962 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 P4HA2O15460 535 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 STX10O60499 249 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 CAPN2P17655 700 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 GTF2H1P32780 548 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 MGAT3Q09327 533 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 TMEM62Q0P6H9 643 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 PSMD6Q15008 389 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 SYCP1Q15431 976 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 KYAT1Q16773 422 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 EEF1DP3Q658K8 133 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 PLEKHO2Q8TD55 490 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 WNT8BQ93098 351 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 PPP1R16BQ96T49 567 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 OSMRQ99650 979 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 FAM213AQ9BRX8 229 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 NUP58Q9BVL2 599 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 CDT1Q9H211 546 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 STARD7Q9NQZ5 370 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 ANKFY1Q9P2R3 1169 aa17.11■□□□□ 0.33
TMED1-201ENST00000214869 PES1O00541 588 aaKnown RBP17.1■□□□□ 0.33
TMED1-201ENST00000214869 N4BP1O75113 896 aaKnown RBP17.1■□□□□ 0.33
TMED1-201ENST00000214869 CSDE1O75534 798 aaKnown RBP17.1■□□□□ 0.33
TMED1-201ENST00000214869 ERLIN2O94905 339 aa17.1■□□□□ 0.33
TMED1-201ENST00000214869 PTMAP06454 111 aaKnown RBP17.1■□□□□ 0.33
TMED1-201ENST00000214869 SFPQP23246 707 aaKnown RBP eCLIP17.1■□□□□ 0.33
TMED1-201ENST00000214869 HOXA11P31270 313 aaPredicted RBP17.1■□□□□ 0.33
TMED1-201ENST00000214869 FMO5P49326 533 aa17.1■□□□□ 0.33
TMED1-201ENST00000214869 RBL2Q08999 1139 aa17.1■□□□□ 0.33
TMED1-201ENST00000214869 NCBP1Q09161 790 aaKnown RBP17.1■□□□□ 0.33
TMED1-201ENST00000214869 KCNMA1Q12791 1236 aa17.1■□□□□ 0.33
TMED1-201ENST00000214869 ZNF568Q3ZCX4 644 aa17.1■□□□□ 0.33
TMED1-201ENST00000214869 CCDC186Q7Z3E2 898 aa17.1■□□□□ 0.33
TMED1-201ENST00000214869 RDH13Q8NBN7 331 aa17.1■□□□□ 0.33
TMED1-201ENST00000214869 CCDC51Q96ER9 411 aa17.1■□□□□ 0.33
TMED1-201ENST00000214869 TCHPQ9BT92 498 aa17.1■□□□□ 0.33
TMED1-201ENST00000214869 EDEM3Q9BZQ6 932 aa17.1■□□□□ 0.33
TMED1-201ENST00000214869 SENP6Q9GZR1 1112 aaPredicted RBP17.1■□□□□ 0.33
TMED1-201ENST00000214869 CPSF3Q9UKF6 684 aaKnown RBP17.1■□□□□ 0.33
TMED1-201ENST00000214869 RALGAPA2Q2PPJ7 1873 aa17.1■□□□□ 0.33
TMED1-201ENST00000214869 M0QZ92 97 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 SGPL1O95470 568 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 DCAF4L1Q3SXM0 396 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 DCAF17Q5H9S7 520 aaPredicted RBP17.09■□□□□ 0.33
TMED1-201ENST00000214869 TCERG1LQ5VWI1 586 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 DPY19L2P1Q6NXN4 242 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 CATSPER4Q7RTX7 472 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 APBB1IPQ7Z5R6 666 aaPredicted RBP17.09■□□□□ 0.33
TMED1-201ENST00000214869 PPFIBP1Q86W92 1011 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 BRSK2Q8IWQ3 736 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 CCDC150Q8NCX0 1101 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 TMEM40Q8WWA1 233 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 DHX38Q92620 1227 aaKnown RBP17.09■□□□□ 0.33
TMED1-201ENST00000214869 TTYH3Q9C0H2 523 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 PLCB1Q9NQ66 1216 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 TRMT13Q9NUP7 481 aaKnown RBP17.09■□□□□ 0.33
TMED1-201ENST00000214869 AGPAT5Q9NUQ2 364 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 CDY2AQ9Y6F7 541 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 SQORQ9Y6N5 450 aa17.09■□□□□ 0.33
TMED1-201ENST00000214869 A0A1W2PQJ5 194 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 CHRNA1P02708 482 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 GYPCP04921 128 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 TRIM49P0CI25 452 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 TRIM49CP0CI26 452 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 MATR3P43243 847 aaKnown RBP eCLIP17.08■□□□□ 0.32
TMED1-201ENST00000214869 ACOT2P49753 483 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 MNX1P50219 401 aaPredicted RBP17.08■□□□□ 0.32
TMED1-201ENST00000214869 DLG4P78352 724 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 SURF1Q15526 300 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 ZBTB41Q5SVQ8 909 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 GBP6Q6ZN66 633 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 ZBTB33Q86T24 672 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 RBAKQ9NYW8 714 aaPredicted RBP17.08■□□□□ 0.32
TMED1-201ENST00000214869 CAPN11Q9UMQ6 739 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 COQ4Q9Y3A0 265 aa17.08■□□□□ 0.32
TMED1-201ENST00000214869 PDCD11Q14690 1871 aaKnown RBP17.07■□□□□ 0.32
TMED1-201ENST00000214869 TRIP11Q15643 1979 aa17.07■□□□□ 0.32
TMED1-201ENST00000214869 LRRIQ3A6PVS8 624 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms