RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 LRRC8BQ6P9F7 803 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 TLK2Q86UE8 772 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 RFWD2Q8NHY2 731 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 PI4KBQ9UBF8 816 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 ORC4O43929 436 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 SORBS3O60504 671 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 RFC5P40937 340 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 YWHAHQ04917 246 aaPredicted RBP11.05□□□□□ -0.64
VCL-201ENST00000211998 ABI1Q8IZP0 508 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 ATP11CQ8NB49 1132 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 KLHL23Q8NBE8 558 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 ERBB3P21860 1342 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 CLRN2A0PK11 232 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 MED7O43513 233 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 UBOX5O94941 541 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 UBE3AQ05086 875 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 SURF1Q15526 300 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 TAF1BQ53T94 588 aaPredicted RBP11.05□□□□□ -0.64
VCL-201ENST00000211998 POTEAQ6S8J7 498 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 RSRC2Q7L4I2 434 aaKnown RBP11.05□□□□□ -0.64
VCL-201ENST00000211998 MARCH10Q8NA82 808 aaPredicted RBP11.05□□□□□ -0.64
VCL-201ENST00000211998 TBCKQ8TEA7 893 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 ACAP3Q96P50 834 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 ANKZF1Q9H8Y5 726 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 CNOT8Q9UFF9 292 aaKnown RBP11.05□□□□□ -0.64
VCL-201ENST00000211998 AKT3Q9Y243 479 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 NCAPD2Q15021 1401 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 SHROOM2Q13796 1616 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 SPDYE16A6NNV3 312 aaPredicted RBP11.05□□□□□ -0.64
VCL-201ENST00000211998 ATP8B3O60423 1300 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 GGPS1O95749 300 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 SPDYE2Q495Y8 402 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 THEMIS2Q5TEJ8 643 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 ITIH6Q6UXX5 1313 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 PPP4R3CPQ6ZMV5 832 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 ZNF507Q8TCN5 953 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 APOL6Q9BWW8 343 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 ZWILCHQ9H900 591 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 DDX18Q9NVP1 670 aaKnown RBP11.05□□□□□ -0.64
VCL-201ENST00000211998 ITGB1BP2Q9UKP3 347 aa11.05□□□□□ -0.64
VCL-201ENST00000211998 DYNLL1P63167 89 aaKnown RBP11.04□□□□□ -0.64
VCL-201ENST00000211998 ATP1A4Q13733 1029 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 ADRM1Q16186 407 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 WDR60Q8WVS4 1066 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 RNPEPQ9H4A4 650 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 TMBIM4Q9HC24 238 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 UBN2Q6ZU65 1347 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 RPS6P62753 249 aaKnown RBP11.04□□□□□ -0.64
VCL-201ENST00000211998 GRAPQ13588 217 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 IZUMO2Q6UXV1 221 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 OR9Q1Q8NGQ5 310 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 GRAPLQ8TC17 118 aaPredicted RBP11.04□□□□□ -0.64
VCL-201ENST00000211998 MARCOQ9UEW3 520 aaPredicted RBP11.04□□□□□ -0.64
VCL-201ENST00000211998 CHEK2O96017 543 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 TAC1P20366 129 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 LIFRP42702 1097 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 GRIN1Q05586 938 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 KCTD1Q719H9 257 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 FUKQ8N0W3 1084 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 RYBPQ8N488 228 aaPredicted RBP11.04□□□□□ -0.64
VCL-201ENST00000211998 AGR3Q8TD06 166 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 RBM41Q96IZ5 413 aaKnown RBP11.04□□□□□ -0.64
VCL-201ENST00000211998 PIGSQ96S52 555 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 BRIP1Q9BX63 1249 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 ROPN1BQ9BZX4 212 aaPredicted RBP11.04□□□□□ -0.64
VCL-201ENST00000211998 ROPN1Q9HAT0 212 aaPredicted RBP11.04□□□□□ -0.64
VCL-201ENST00000211998 AP4S1Q9Y587 144 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 CFAP65Q6ZU64 1925 aaKnown RBP11.04□□□□□ -0.64
VCL-201ENST00000211998 MXI1P50539 228 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 UNC13DQ70J99 1090 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 FOXP4Q8IVH2 680 aaPredicted RBP11.04□□□□□ -0.64
VCL-201ENST00000211998 SPICE1Q8N0Z3 855 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 LCORLQ8N3X6 602 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 CCNYL1Q8N7R7 359 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 GPR101Q96P66 508 aaPredicted RBP11.04□□□□□ -0.64
VCL-201ENST00000211998 SEC31BQ9NQW1 1179 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 SYBUQ9NX95 663 aa11.04□□□□□ -0.64
VCL-201ENST00000211998 MEIS1O00470 390 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 NFIBO00712 420 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 PSAPP07602 524 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 PLA2G4BP0C869 781 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 ENO3P13929 434 aaPredicted RBP11.03□□□□□ -0.64
VCL-201ENST00000211998 ROR2Q01974 943 aaKnown RBP11.03□□□□□ -0.64
VCL-201ENST00000211998 C16orf72Q14CZ0 275 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 PLEKHA7Q6IQ23 1121 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 TTC33Q6PID6 262 aaPredicted RBP11.03□□□□□ -0.64
VCL-201ENST00000211998 PRPF39Q86UA1 669 aaKnown RBP11.03□□□□□ -0.64
VCL-201ENST00000211998 RTKN2Q8IZC4 609 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 CEP170P1Q96L14 293 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 COA1Q9GZY4 146 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 ZNF446Q9NWS9 450 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 KIF17Q9P2E2 1029 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 INO80B-WBP1J3KQ70 363 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 GYS1P13807 737 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 HSPA13P48723 471 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 KCNH2Q12809 1159 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 INPP5AQ14642 412 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 SF3B3Q15393 1217 aaKnown RBP11.03□□□□□ -0.64
VCL-201ENST00000211998 KRT27Q7Z3Y8 459 aa11.03□□□□□ -0.64
VCL-201ENST00000211998 RBBP8NLQ8NC74 664 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms