RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 PROZP22891 400 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 HOXD13P35453 343 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 RAB27AP51159 221 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 BTG3Q14201 252 aaPredicted RBP13.19□□□□□ -0.3
SYPL1-201ENST00000011473 ISM2Q6H9L7 571 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 KANK3Q6NY19 840 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 THNSL1Q8IYQ7 743 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 GPT2Q8TD30 523 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 SCFD1Q8WVM8 642 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 CCDC51Q96ER9 411 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 TIGD1Q96MW7 591 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 MSRAQ9UJ68 235 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 MAPK8IP1Q9UQF2 711 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 PCDHA5Q9Y5H7 936 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 PCDHA11Q9Y5I1 949 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 COL4A6Q14031 1691 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 CLDN3O15551 220 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 EOMESO95936 686 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 ITGA4P13612 1032 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 MLH1P40692 756 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
SYPL1-201ENST00000011473 L1TD1Q5T7N2 865 aaKnown RBP13.19□□□□□ -0.3
SYPL1-201ENST00000011473 PPP2R2DQ66LE6 453 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 ZPBP2Q6X784 338 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 SMYD4Q8IYR2 804 aaPredicted RBP13.19□□□□□ -0.3
SYPL1-201ENST00000011473 ABI1Q8IZP0 508 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 SYCP3Q8IZU3 236 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 SLC17A8Q8NDX2 589 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 CASD1Q96PB1 797 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 PARP2Q9UGN5 583 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 MYH11P35749 1972 aa13.19□□□□□ -0.3
SYPL1-201ENST00000011473 TTC3P53804 2025 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 LINC01553A4QN01 128 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 GOLGA6L22H0YM25 854 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 NOLC1Q14978 699 aaKnown RBP eCLIP13.18□□□□□ -0.3
SYPL1-201ENST00000011473 RAB30Q15771 203 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 ZBTB41Q5SVQ8 909 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 Q7L0L9 218 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 EPM2AIP1Q7L775 607 aaPredicted RBP13.18□□□□□ -0.3
SYPL1-201ENST00000011473 MRPL10Q7Z7H8 261 aaKnown RBP13.18□□□□□ -0.3
SYPL1-201ENST00000011473 KCNN1Q92952 543 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 CCDC34Q96HJ3 373 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 ACCSQ96QU6 501 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 GAD1Q99259 594 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 RSAD1Q9HA92 442 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 SLC28A3Q9HAS3 691 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 MRPL42Q9Y6G3 142 aaKnown RBP13.18□□□□□ -0.3
SYPL1-201ENST00000011473 ZMYM2Q9UBW7 1377 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 OFD1O75665 1012 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 RECQL4O94761 1208 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 POMCP01189 267 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 SKIP12755 728 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 ADSSP30520 456 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 PBX3P40426 434 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 TAP1Q03518 808 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 LRRC55Q6ZSA7 311 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 ZSWIM2Q8NEG5 633 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 C17orf80Q9BSJ5 609 aa13.18□□□□□ -0.3
SYPL1-201ENST00000011473 TTYH1Q9H313 450 aaPredicted RBP13.18□□□□□ -0.3
SYPL1-201ENST00000011473 TYW1Q9NV66 732 aaKnown RBP13.18□□□□□ -0.3
SYPL1-201ENST00000011473 ARL5CA6NH57 179 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 BIN1O00499 593 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 RHOBTB3O94955 611 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 PIGRP01833 764 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 TNFSF9P41273 254 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 MCL1Q07820 350 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 GLB1LQ6UWU2 654 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 HVCN1Q96D96 273 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 PGBD4Q96DM1 585 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 CBWD1Q9BRT8 395 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 GBP3Q9H0R5 595 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 MIOSQ9NXC5 875 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 PLAGL2Q9UPG8 496 aa13.17□□□□□ -0.3
SYPL1-201ENST00000011473 TULP1O00294 542 aaPredicted RBP13.16□□□□□ -0.3
SYPL1-201ENST00000011473 B4GALT3O60512 393 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 LINC00271P0C7V0 271 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 SCNN1GP51170 649 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 DCAF4L1Q3SXM0 396 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 GLRA4Q5JXX5 417 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 FIBCD1Q8N539 461 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 GSTCDQ8NEC7 633 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 SPATA20Q8TB22 786 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 ZNF507Q8TCN5 953 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
SYPL1-201ENST00000011473 NOC3LQ8WTT2 800 aaKnown RBP13.16□□□□□ -0.3
SYPL1-201ENST00000011473 POMGNT1Q8WZA1 660 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 MSTO1Q9BUK6 570 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 TMEM117Q9H0C3 514 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 PCIF1Q9H4Z3 704 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 ZNF576Q9H609 170 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 HOOK1Q9UJC3 728 aaKnown RBP13.16□□□□□ -0.3
SYPL1-201ENST00000011473 A0A0B4J269 797 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 EIF3DO15371 548 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■□□□□ 9.2
SYPL1-201ENST00000011473 MEFVO15553 781 aaPredicted RBP13.16□□□□□ -0.3
SYPL1-201ENST00000011473 TGFB1I1O43294 461 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 MCF2P10911 925 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 COL6A3P12111 3177 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms