RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Aimp1P31230 310 aaKnown RBP20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Hmgb1P63158 215 aaKnown RBP20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Phka2Q8BWJ3 1235 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Fam78aQ8C552 283 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Vps52Q8C754 723 aaKnown RBP20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Gpc3Q8CFZ4 579 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 B4galt3Q91YY2 395 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Galnt15Q9D2N8 638 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Abhd2Q9QXM0 425 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Egfl7Q9QXT5 275 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Arid2E9Q7E2 1828 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Akap17bA2A3V1 959 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Prl2c2P04095 224 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 P04214 136 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Pla2g4aP47713 748 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 VegfaQ00731 214 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Csf2raQ00941 388 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Edem3Q2HXL6 931 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Dll1Q61483 722 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Has1Q61647 583 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Fgd5Q80UZ0 1219 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Rpp40Q8R1F9 363 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Vwa1Q8R2Z5 415 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Csde1Q91W50 798 aaKnown RBP20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Pcdha2Q91Y17 948 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Med10Q9CXU0 135 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Tnfrsf10bQ9QZM4 381 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Magi2Q9WVQ1 1275 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Prl2c3P04768 224 aa20.42■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Yap1P46938 488 aa20.42■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Cct6aP80317 531 aaKnown RBP20.42■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Abi3bpQ59IW6 1179 aa20.42■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Atp13a4Q5XF90 1193 aa20.42■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Klhl17Q6TDP3 640 aa20.42■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Lrfn2Q80TG9 788 aa20.42■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Cyth4Q80YW0 393 aa20.42■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Tmem260Q8BMD6 703 aa20.42■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Bcl11aQ9QYE3 773 aa20.42■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Nek3Q9R0A5 511 aa20.42■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Zkscan7E9PVW1 718 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Gimap9G3X987 291 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Art2aP17981 287 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Pde6bP23440 856 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Oaz1P54369 227 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Mark3Q03141 753 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Carmil2Q3V3V9 1296 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Ift88Q61371 824 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Rhbdf1Q6PIX5 856 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Tmem220Q8BP07 167 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Rasal3Q8C2K5 1041 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Rftn2Q8CHX7 500 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Sgms1Q8VCQ6 419 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Lmcd1Q8VEE1 365 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Spred2Q924S7 410 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 GhdcQ99J23 532 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Sdr42e1Q9D665 394 aa20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Utp3Q9JI13 469 aaKnown RBP20.41■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Zscan4-ps1A0A1C7CYV3 506 aa20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Zfp457L7N1X4 647 aa20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 SarsP26638 512 aaKnown RBP20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Sparcl1P70663 650 aa20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Smpd1Q04519 627 aa20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Cd163Q2VLH6 1121 aa20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Ttc26Q8BS45 554 aa20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Rapgef5Q8C0Q9 814 aa20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Pym1Q8CHP5 203 aaKnown RBP20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 MiosQ8VE19 875 aa20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Q9D2Q3 444 aa20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Itga2bQ9QUM0 1033 aa20.4■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Myo16Q5DU14 1919 aa20.39■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Scgb2b18A0A087WPA9 112 aa20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Tmem240B2RWJ3 173 aa20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Fam124aD3Z5V4 536 aa20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Plekha5E9Q6H8 1269 aa20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Hace1Q3U0D9 909 aa20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Armcx2Q6A058 784 aaKnown RBP20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Ints8Q80V86 995 aa20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Reps2Q80XA6 521 aa20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Rnf214Q8BFU3 668 aaKnown RBP20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Traf3ip3Q8C0G2 513 aa20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Psmd6Q99JI4 389 aa20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Irx5Q9JKQ4 484 aa20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 PollQ9QXE2 573 aaKnown RBP20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 JmyQ9QXM1 983 aa20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Knop1Q9Z2Q2 478 aaKnown RBP20.39■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Gimd1E9PW74 217 aa20.38■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Ndufs6P52503 116 aa20.38■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Isy1Q69ZQ2 285 aaKnown RBP20.38■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Krt39Q6IFX4 482 aa20.38■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Styk1Q6J9G1 429 aa20.38■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Rpf1Q7TND5 349 aaKnown RBP20.38■□□□□ 0.85
Scn1b-203ENSMUST00000211945 RimklbQ80WS1 387 aa20.38■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Serpina3bQ8BYY9 420 aa20.38■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Nr1h3Q9Z0Y9 445 aa20.38■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Vmn2r121A2BE32 847 aa20.37■□□□□ 0.85
Scn1b-203ENSMUST00000211945 IapP03975 557 aa20.37■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Usp10P52479 792 aaKnown RBP20.37■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Rplp2P99027 115 aaKnown RBP20.37■□□□□ 0.85
Scn1b-203ENSMUST00000211945 GartQ64737 1010 aa20.37■□□□□ 0.85
Scn1b-203ENSMUST00000211945 Daam2Q80U19 1115 aa20.37■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms