RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Asprv1Q09PK2 339 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Ankrd34bQ3UUF8 508 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 FancbQ5XJY6 703 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Tbc1d1Q60949 1255 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Usp49Q6P9L4 685 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Agap1Q8BXK8 857 aaKnown RBP11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Rhobtb3Q9CTN4 611 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Crb1Q8VHS2 1405 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Apol11bE9PUZ0 337 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Olfr67F8VPJ8 320 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Pde6bP23440 856 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Ddah1Q9CWS0 285 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Itpripl1A2ASA8 547 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Syt2P46097 422 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Arhgef16Q3U5C8 713 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Rbbp7Q60973 425 aaKnown RBP11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Tlr13Q6R5N8 991 aa11.72□□□□□ -0.53
Scn8a-203ENSMUST00000108908 D830030K20RikE9PYQ5 218 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Gm3043K7N693 218 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Gm16440K7N6G6 218 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Gm2244L7N2A3 218 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Gm3278L7N2D2 218 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Gm8271L7N2E2 218 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Spata5Q3UMC0 893 aaKnown RBP11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 ParvaQ9EPC1 372 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Gyg1Q9R062 333 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Zc3h13E9Q784 1729 aaKnown RBP11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Lrrc38A2VDH3 298 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 RcvrnP34057 202 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Grin1P35438 938 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 CebpaP53566 359 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Fam89aQ14BJ1 175 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Arhgap17Q3UIA2 846 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Chordc1Q9D1P4 331 aaKnown RBP11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Mrpl4Q9DCU6 294 aaKnown RBP11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Asah2Q9JHE3 756 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Mst1rQ62190 1378 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Nccrp1G3X9C2 266 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 UrosP51163 265 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Ephx4Q6IE26 359 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Q8BGN9 141 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Spice1Q8C804 860 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Agr3Q8R3W7 165 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 CbsQ91WT9 561 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Psmd9Q9CR00 222 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 TarsQ9D0R2 722 aaKnown RBP11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Tecpr2Q3UH45 1423 aa11.71□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Pth1rP41593 591 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 D630036H23RikQ3UQD6 204 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tll1Q62381 1013 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ppp2r2aQ6P1F6 447 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Olfr119Q7TRJ5 321 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Nemp2Q8CB65 421 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Grin3bQ91ZU9 1003 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Calr3Q9D9Q6 380 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Cog1Q9Z160 980 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Gm5689F6Y2A6 97 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Efna5O08543 228 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 PrkceP16054 737 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Nlrp4cQ3TKR3 982 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Trappc3lQ4KL14 181 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 OafQ8QZR4 282 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Trpc7Q9WVC5 862 aa11.71□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Soat2O88908 525 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Dpf2Q61103 391 aaKnown RBP11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Spef2Q8C9J3 1734 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Rhox3fA2ANE1 215 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Arhgef26D3YYY8 869 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tmem59lQ7TNI2 337 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Phactr3Q8BYK5 558 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Catsper1Q91ZR5 686 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Nuf2Q99P69 463 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 GakQ99KY4 1305 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Apol7bB1AQP7 369 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 AF366264G3X9P9 502 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 GfapP03995 430 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Hcls1P49710 486 aaKnown RBP11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Frmd4aQ8BIE6 1020 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Heatr3Q8BQM4 679 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Agap3Q8VHH5 910 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 HnmtQ91VF2 295 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tgm5Q9D7I9 724 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Itga2bQ9QUM0 1033 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Zfp626A0A0U1RQ84 676 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ugt1a8D3Z748 530 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ugt1a10E9PXN7 530 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 RpsaP14206 295 aaKnown RBP11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Psma2P49722 234 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 GmpsQ3THK7 693 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Capn13Q3UW68 665 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Mageb18Q8BQR7 327 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Eps8l1Q8R5F8 716 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 SpdyaQ5IBH7 310 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ttc7aQ8BGB2 858 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Armc6Q8BNU0 468 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Slc8a2Q8K596 921 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tada3Q8R0L9 432 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 MypopQ8R4U1 393 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Emc2Q9CRD2 297 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tmem206Q9D771 350 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms