RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Tmem206Q9D771 350 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Capn10Q9ESK3 666 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Kiaa1551Q5DTW7 1521 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 SfnO70456 248 aaKnown RBP14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Mark3Q03141 753 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Ccdc127Q3TC33 260 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Rnpc3Q3UZ01 514 aaKnown RBP14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 CtifQ6PEE2 600 aaKnown RBP14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Fam102aQ78T81 392 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Fam49aQ8BHZ0 323 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 LzicQ8K3C3 190 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Satb2Q8VI24 733 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Itga2bQ9QUM0 1033 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Nr1h3Q9Z0Y9 445 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 P01734 135 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Tmcc1Q69ZZ6 649 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Susd4Q8BH32 490 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 MrgbpQ9DAT2 204 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Pold3Q9EQ28 462 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Rpf2Q9JJ80 306 aaKnown RBP14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Cylc2B1AWN8 422 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Ccdc144bE9PVZ3 520 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Slc1a1P51906 523 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Ankrd23Q812A3 306 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 McamQ8R2Y2 648 aaKnown RBP14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 FdpsQ920E5 353 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 NptxrQ99J85 493 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Pfdn1Q9CWM4 122 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 DtnaQ9D2N4 746 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 PtsQ9R1Z7 144 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Plch2A2AP18 1501 aa14.75□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Lamc1P02468 1607 aaKnown RBP14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Usp54Q8BL06 1588 aaKnown RBP14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Kcng1A2BDX4 514 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Foxp2P58463 714 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Atp6v1b2P62814 511 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Krt86P97861 486 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Ctdnep1Q3TP92 244 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Xlr3aQ60595 226 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Dcaf15Q6PFH3 600 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Tlk1Q8C0V0 766 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Tmem132cQ8CEF9 1099 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Btbd6Q8K2J9 488 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Msi2Q920Q6 346 aaKnown RBP14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Gm28036V9GXJ1 658 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Gm3173A6NAS3 172 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Gm3020E9Q3J7 150 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Gm5689F6Y2A6 97 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Gm2897K7N6T7 172 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Oog4Q4G0C7 502 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Q6DFW0 481 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Letm2Q7TNU7 480 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Ppp1r37Q8BKR5 712 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Gm3411Q8C7R2 150 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Slf1Q8R3P9 1054 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 CinpQ9D0V8 212 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 C1qtnf1Q9QXP7 281 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Kif1bQ60575 1816 aaKnown RBP14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 MeiocA2AG06 965 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Znf711A2ANX9 761 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Sema3fO88632 785 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Edem3Q2HXL6 931 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Wdr41Q3UDP0 460 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Sco1Q5SUC9 284 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Lilrb4Q64281 335 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Rmnd1Q8CI78 450 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 ZwilchQ8R060 589 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Cib4Q9D9N5 185 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Rassf7Q9DD19 359 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Gipc2Q9Z2H7 314 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Tmc5Q32NZ6 967 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Tmem120bQ3TA38 339 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Spout1Q3UHX9 385 aaKnown RBP14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Tspyl5Q69ZB3 406 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Fam196bQ6GQV1 535 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Zfp341Q6PGC9 846 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Kcns3Q8BQZ8 491 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 PccaQ91ZA3 724 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Alg1Q921Q3 482 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Ndufa13Q9ERS2 144 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Eif2ak3Q9Z2B5 1114 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Zfp788E9Q980 884 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Gm3460E9QAI8 215 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Tdpoz2Q717B2 364 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Tbc1d22bQ80VE5 505 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Alkbh8Q80Y20 664 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Leng8Q8CBY3 785 aaKnown RBP14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Vps37aQ8CHS8 397 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Ddah1Q9CWS0 285 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 MrrfQ9D6S7 262 aaKnown RBP14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Sgpp1Q9JI99 430 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Deaf1Q9Z1T5 566 aa14.74□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Zfp651E9PZ11 729 aa14.73□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Psmd14O35593 310 aa14.73□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Sipa1P46062 1037 aa14.73□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Psma2P49722 234 aa14.73□□□□□ -0.05
Col3a1-201ENSMUST00000087883 InscQ3HNM7 579 aa14.73□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Dmc1Q61880 340 aa14.73□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Ing3Q8VEK6 421 aa14.73□□□□□ -0.05
Col3a1-201ENSMUST00000087883 Klra17Q9JMA4 273 aa14.73□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms